Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
COL5A2P05997 AC141586.3-201ENST00000562166 1838 ntBASIC24.41■■□□□ 1.5
COL5A2P05997 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC24.41■■□□□ 1.5
COL5A2P05997 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
COL5A2P05997 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
COL5A2P05997 AC104109.2-201ENST00000602919 1418 ntBASIC24.41■■□□□ 1.5
COL5A2P05997 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL5A2P05997 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC24.41■■□□□ 1.5
COL5A2P05997 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL5A2P05997 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
COL5A2P05997 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC24.4■■□□□ 1.5
COL5A2P05997 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
COL5A2P05997 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
COL5A2P05997 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC24.4■■□□□ 1.5
COL5A2P05997 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL5A2P05997 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC24.4■■□□□ 1.5
COL5A2P05997 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL5A2P05997 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC24.4■■□□□ 1.5
COL5A2P05997 AL138831.2-201ENST00000606564 490 ntBASIC24.4■■□□□ 1.5
COL5A2P05997 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC24.4■■□□□ 1.5
COL5A2P05997 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC24.4■■□□□ 1.5
COL5A2P05997 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
COL5A2P05997 INTS4P1-201ENST00000438455 1935 ntBASIC24.4■■□□□ 1.5
COL5A2P05997 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC24.4■■□□□ 1.5
COL5A2P05997 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC24.4■■□□□ 1.5
COL5A2P05997 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
COL5A2P05997 AL163051.1-201ENST00000569214 1512 ntBASIC24.4■■□□□ 1.5
COL5A2P05997 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL5A2P05997 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
COL5A2P05997 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC24.4■■□□□ 1.5
COL5A2P05997 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
COL5A2P05997 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL5A2P05997 NARF-204ENST00000390006 1766 ntTSL 2 BASIC24.4■■□□□ 1.5
COL5A2P05997 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL5A2P05997 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC24.4■■□□□ 1.5
COL5A2P05997 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC24.4■■□□□ 1.5
COL5A2P05997 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
COL5A2P05997 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
COL5A2P05997 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.5
COL5A2P05997 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC24.39■■□□□ 1.5
COL5A2P05997 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
COL5A2P05997 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
COL5A2P05997 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
COL5A2P05997 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC24.39■■□□□ 1.5
COL5A2P05997 SART3-203ENST00000546611 1184 ntBASIC24.39■■□□□ 1.5
COL5A2P05997 AC021087.4-201ENST00000563761 564 ntBASIC24.39■■□□□ 1.5
COL5A2P05997 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC24.39■■□□□ 1.5
COL5A2P05997 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC24.39■■□□□ 1.5
COL5A2P05997 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
COL5A2P05997 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
COL5A2P05997 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC24.39■■□□□ 1.5
COL5A2P05997 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC24.39■■□□□ 1.49
COL5A2P05997 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
COL5A2P05997 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
COL5A2P05997 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
COL5A2P05997 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.49
COL5A2P05997 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL5A2P05997 LBH-204ENST00000406087 559 ntTSL 4 BASIC24.38■■□□□ 1.49
COL5A2P05997 MED15P5-201ENST00000423150 992 ntBASIC24.38■■□□□ 1.49
COL5A2P05997 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC24.38■■□□□ 1.49
COL5A2P05997 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC24.38■■□□□ 1.49
COL5A2P05997 AC010327.4-202ENST00000591484 748 ntBASIC24.38■■□□□ 1.49
COL5A2P05997 FAM197Y3-203ENST00000618346 717 ntBASIC24.38■■□□□ 1.49
COL5A2P05997 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL5A2P05997 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC24.38■■□□□ 1.49
COL5A2P05997 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
COL5A2P05997 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL5A2P05997 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC24.38■■□□□ 1.49
COL5A2P05997 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL5A2P05997 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL5A2P05997 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL5A2P05997 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC24.38■■□□□ 1.49
COL5A2P05997 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
COL5A2P05997 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
COL5A2P05997 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
COL5A2P05997 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC24.38■■□□□ 1.49
COL5A2P05997 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC24.38■■□□□ 1.49
COL5A2P05997 NMU-202ENST00000505262 693 ntTSL 3 BASIC24.38■■□□□ 1.49
COL5A2P05997 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
COL5A2P05997 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC24.38■■□□□ 1.49
COL5A2P05997 AC012640.2-201ENST00000561606 901 ntBASIC24.38■■□□□ 1.49
COL5A2P05997 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
COL5A2P05997 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL5A2P05997 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
COL5A2P05997 NFYC-AS1-201ENST00000606277 1687 ntBASIC24.37■■□□□ 1.49
COL5A2P05997 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL5A2P05997 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL5A2P05997 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL5A2P05997 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL5A2P05997 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC24.37■■□□□ 1.49
COL5A2P05997 AC098831.1-202ENST00000438821 336 ntBASIC24.37■■□□□ 1.49
COL5A2P05997 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC24.37■■□□□ 1.49
COL5A2P05997 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC24.37■■□□□ 1.49
COL5A2P05997 AL356488.2-201ENST00000602755 427 ntBASIC24.37■■□□□ 1.49
COL5A2P05997 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC24.37■■□□□ 1.49
COL5A2P05997 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC24.37■■□□□ 1.49
COL5A2P05997 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
COL5A2P05997 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
COL5A2P05997 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC24.36■■□□□ 1.49
COL5A2P05997 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms