Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOEP02649 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.46■□□□□ 0.71
APOEP02649 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
APOEP02649 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.46■□□□□ 0.71
APOEP02649 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOEP02649 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOEP02649 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
APOEP02649 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOEP02649 AC090340.1-201ENST00000620778 4980 ntBASIC19.46■□□□□ 0.71
APOEP02649 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
APOEP02649 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
APOEP02649 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOEP02649 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
APOEP02649 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
APOEP02649 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
APOEP02649 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.45■□□□□ 0.7
APOEP02649 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOEP02649 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
APOEP02649 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
APOEP02649 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOEP02649 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
APOEP02649 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
APOEP02649 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOEP02649 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.45■□□□□ 0.7
APOEP02649 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOEP02649 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
APOEP02649 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
APOEP02649 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOEP02649 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.45■□□□□ 0.7
APOEP02649 AC009947.2-201ENST00000444014 672 ntBASIC19.45■□□□□ 0.7
APOEP02649 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
APOEP02649 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.45■□□□□ 0.7
APOEP02649 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.45■□□□□ 0.7
APOEP02649 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
APOEP02649 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOEP02649 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
APOEP02649 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOEP02649 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.45■□□□□ 0.7
APOEP02649 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.45■□□□□ 0.7
APOEP02649 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOEP02649 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
APOEP02649 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.45■□□□□ 0.7
APOEP02649 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOEP02649 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
APOEP02649 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.44■□□□□ 0.7
APOEP02649 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOEP02649 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
APOEP02649 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.44■□□□□ 0.7
APOEP02649 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOEP02649 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOEP02649 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
APOEP02649 AC008556.1-201ENST00000610908 2040 ntBASIC19.44■□□□□ 0.7
APOEP02649 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOEP02649 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOEP02649 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOEP02649 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
APOEP02649 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOEP02649 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.44■□□□□ 0.7
APOEP02649 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
APOEP02649 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.44■□□□□ 0.7
APOEP02649 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.44■□□□□ 0.7
APOEP02649 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.44■□□□□ 0.7
APOEP02649 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.44■□□□□ 0.7
APOEP02649 AC083906.6-201ENST00000641366 219 ntBASIC19.44■□□□□ 0.7
APOEP02649 AC068587.9-201ENST00000641814 219 ntBASIC19.44■□□□□ 0.7
APOEP02649 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
APOEP02649 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOEP02649 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOEP02649 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOEP02649 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOEP02649 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
APOEP02649 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
APOEP02649 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
APOEP02649 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
APOEP02649 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
APOEP02649 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
APOEP02649 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOEP02649 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.43■□□□□ 0.7
APOEP02649 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.43■□□□□ 0.7
APOEP02649 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOEP02649 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOEP02649 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOEP02649 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOEP02649 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOEP02649 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.43■□□□□ 0.7
APOEP02649 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOEP02649 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.43■□□□□ 0.7
APOEP02649 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.43■□□□□ 0.7
APOEP02649 COX11P1-201ENST00000489116 835 ntBASIC19.43■□□□□ 0.7
APOEP02649 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.43■□□□□ 0.7
APOEP02649 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.43■□□□□ 0.7
APOEP02649 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.43■□□□□ 0.7
APOEP02649 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.43■□□□□ 0.7
APOEP02649 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOEP02649 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOEP02649 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.43■□□□□ 0.7
APOEP02649 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOEP02649 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOEP02649 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOEP02649 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms