Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KRT6AP02538 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.03■□□□□ 0.48
KRT6AP02538 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.03■□□□□ 0.48
KRT6AP02538 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.03■□□□□ 0.48
KRT6AP02538 AC142381.4-202ENST00000563973 229 ntBASIC18.03■□□□□ 0.48
KRT6AP02538 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
KRT6AP02538 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KRT6AP02538 KRT8P45-201ENST00000414328 1447 ntBASIC18.03■□□□□ 0.48
KRT6AP02538 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT6AP02538 AL354751.1-201ENST00000412768 1863 ntBASIC18.03■□□□□ 0.48
KRT6AP02538 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
KRT6AP02538 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT6AP02538 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT6AP02538 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.03■□□□□ 0.48
KRT6AP02538 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KRT6AP02538 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
KRT6AP02538 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT6AP02538 AL499627.1-201ENST00000569373 2188 ntBASIC18.03■□□□□ 0.48
KRT6AP02538 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT6AP02538 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KRT6AP02538 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRT6AP02538 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRT6AP02538 AC007613.1-201ENST00000572811 2597 ntBASIC18.02■□□□□ 0.48
KRT6AP02538 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
KRT6AP02538 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
KRT6AP02538 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.02■□□□□ 0.48
KRT6AP02538 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
KRT6AP02538 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.02■□□□□ 0.48
KRT6AP02538 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
KRT6AP02538 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRT6AP02538 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KRT6AP02538 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.02■□□□□ 0.48
KRT6AP02538 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRT6AP02538 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.02■□□□□ 0.48
KRT6AP02538 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KRT6AP02538 MESTP1-201ENST00000404287 994 ntBASIC18.02■□□□□ 0.48
KRT6AP02538 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.02■□□□□ 0.48
KRT6AP02538 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRT6AP02538 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.02■□□□□ 0.48
KRT6AP02538 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.02■□□□□ 0.48
KRT6AP02538 AL162741.1-201ENST00000565563 1558 ntBASIC18.02■□□□□ 0.48
KRT6AP02538 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.02■□□□□ 0.48
KRT6AP02538 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.02■□□□□ 0.48
KRT6AP02538 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.02■□□□□ 0.48
KRT6AP02538 AP001412.1-201ENST00000608405 714 ntBASIC18.02■□□□□ 0.48
KRT6AP02538 DGCR10-201ENST00000609839 495 ntBASIC18.02■□□□□ 0.48
KRT6AP02538 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.02■□□□□ 0.48
KRT6AP02538 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.02■□□□□ 0.48
KRT6AP02538 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.02■□□□□ 0.48
KRT6AP02538 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
KRT6AP02538 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
KRT6AP02538 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
KRT6AP02538 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
KRT6AP02538 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
KRT6AP02538 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
KRT6AP02538 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
KRT6AP02538 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
KRT6AP02538 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
KRT6AP02538 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.02■□□□□ 0.47
KRT6AP02538 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.47
KRT6AP02538 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT6AP02538 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT6AP02538 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT6AP02538 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KRT6AP02538 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT6AP02538 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.01■□□□□ 0.47
KRT6AP02538 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT6AP02538 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.01■□□□□ 0.47
KRT6AP02538 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT6AP02538 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT6AP02538 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT6AP02538 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KRT6AP02538 UBE2SP1-201ENST00000450587 669 ntBASIC18.01■□□□□ 0.47
KRT6AP02538 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KRT6AP02538 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.01■□□□□ 0.47
KRT6AP02538 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.01■□□□□ 0.47
KRT6AP02538 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KRT6AP02538 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
KRT6AP02538 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KRT6AP02538 AL109659.2-201ENST00000606809 1674 ntBASIC18.01■□□□□ 0.47
KRT6AP02538 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
KRT6AP02538 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT6AP02538 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.01■□□□□ 0.47
KRT6AP02538 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.01■□□□□ 0.47
KRT6AP02538 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT6AP02538 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KRT6AP02538 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.01■□□□□ 0.47
KRT6AP02538 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT6AP02538 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
KRT6AP02538 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT6AP02538 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18■□□□□ 0.47
KRT6AP02538 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT6AP02538 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT6AP02538 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRT6AP02538 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18■□□□□ 0.47
KRT6AP02538 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18■□□□□ 0.47
KRT6AP02538 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18■□□□□ 0.47
KRT6AP02538 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
KRT6AP02538 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18■□□□□ 0.47
KRT6AP02538 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms