Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.67■□□□□ 0.58
RFPL1O75677 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFPL1O75677 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.67■□□□□ 0.58
RFPL1O75677 LTB4R2-202ENST00000528054 3092 ntBASIC18.67■□□□□ 0.58
RFPL1O75677 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RFPL1O75677 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.67■□□□□ 0.58
RFPL1O75677 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RFPL1O75677 RCN1P1-201ENST00000400413 996 ntBASIC18.67■□□□□ 0.58
RFPL1O75677 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFPL1O75677 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
RFPL1O75677 AP003071.4-201ENST00000562276 1284 ntBASIC18.67■□□□□ 0.58
RFPL1O75677 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFPL1O75677 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFPL1O75677 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFPL1O75677 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFPL1O75677 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RFPL1O75677 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFPL1O75677 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RFPL1O75677 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFPL1O75677 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFPL1O75677 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.66■□□□□ 0.58
RFPL1O75677 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RFPL1O75677 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFPL1O75677 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFPL1O75677 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFPL1O75677 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFPL1O75677 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
RFPL1O75677 AL357033.4-201ENST00000617703 1807 ntBASIC18.66■□□□□ 0.58
RFPL1O75677 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFPL1O75677 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFPL1O75677 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RFPL1O75677 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFPL1O75677 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFPL1O75677 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.66■□□□□ 0.58
RFPL1O75677 KRT16P5-201ENST00000455284 522 ntBASIC18.66■□□□□ 0.58
RFPL1O75677 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFPL1O75677 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
RFPL1O75677 AF186192.3-201ENST00000583427 947 ntBASIC18.66■□□□□ 0.58
RFPL1O75677 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.66■□□□□ 0.58
RFPL1O75677 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.66■□□□□ 0.58
RFPL1O75677 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFPL1O75677 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.66■□□□□ 0.58
RFPL1O75677 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.66■□□□□ 0.58
RFPL1O75677 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFPL1O75677 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFPL1O75677 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RFPL1O75677 HTR7P1-201ENST00000538670 1336 ntBASIC18.66■□□□□ 0.58
RFPL1O75677 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RFPL1O75677 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RFPL1O75677 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.66■□□□□ 0.58
RFPL1O75677 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
RFPL1O75677 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.66■□□□□ 0.58
RFPL1O75677 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFPL1O75677 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RFPL1O75677 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.66■□□□□ 0.58
RFPL1O75677 KRT8P3-201ENST00000519669 1449 ntBASIC18.66■□□□□ 0.58
RFPL1O75677 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.65■□□□□ 0.58
RFPL1O75677 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFPL1O75677 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RFPL1O75677 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFPL1O75677 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFPL1O75677 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RFPL1O75677 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFPL1O75677 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFPL1O75677 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.65■□□□□ 0.58
RFPL1O75677 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFPL1O75677 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.65■□□□□ 0.58
RFPL1O75677 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFPL1O75677 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFPL1O75677 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.65■□□□□ 0.58
RFPL1O75677 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFPL1O75677 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RFPL1O75677 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFPL1O75677 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.65■□□□□ 0.58
RFPL1O75677 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RFPL1O75677 CD177P1-201ENST00000606252 935 ntBASIC18.65■□□□□ 0.58
RFPL1O75677 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.65■□□□□ 0.58
RFPL1O75677 ESPNP-201ENST00000270691 2015 ntBASIC18.65■□□□□ 0.58
RFPL1O75677 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.65■□□□□ 0.58
RFPL1O75677 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFPL1O75677 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.65■□□□□ 0.58
RFPL1O75677 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFPL1O75677 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFPL1O75677 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFPL1O75677 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFPL1O75677 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFPL1O75677 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFPL1O75677 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFPL1O75677 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFPL1O75677 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFPL1O75677 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
RFPL1O75677 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
RFPL1O75677 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RFPL1O75677 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RFPL1O75677 AC093677.2-201ENST00000600169 1863 ntBASIC18.65■□□□□ 0.58
RFPL1O75677 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
RFPL1O75677 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
RFPL1O75677 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
RFPL1O75677 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RFPL1O75677 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms