Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN11O75508 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CLDN11O75508 AL163051.1-201ENST00000569214 1512 ntBASIC18.98■□□□□ 0.63
CLDN11O75508 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN11O75508 LINC01311-201ENST00000565162 1445 ntBASIC18.98■□□□□ 0.63
CLDN11O75508 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CLDN11O75508 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN11O75508 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN11O75508 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CLDN11O75508 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
CLDN11O75508 MYLKP1-201ENST00000509077 1580 ntBASIC18.98■□□□□ 0.63
CLDN11O75508 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CLDN11O75508 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN11O75508 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.97■□□□□ 0.63
CLDN11O75508 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN11O75508 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN11O75508 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CLDN11O75508 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN11O75508 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN11O75508 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.97■□□□□ 0.63
CLDN11O75508 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.97■□□□□ 0.63
CLDN11O75508 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.97■□□□□ 0.63
CLDN11O75508 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.97■□□□□ 0.63
CLDN11O75508 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.97■□□□□ 0.63
CLDN11O75508 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.97■□□□□ 0.63
CLDN11O75508 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.97■□□□□ 0.63
CLDN11O75508 AL121956.5-201ENST00000625261 221 ntBASIC18.97■□□□□ 0.63
CLDN11O75508 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.97■□□□□ 0.63
CLDN11O75508 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.97■□□□□ 0.63
CLDN11O75508 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN11O75508 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN11O75508 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN11O75508 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN11O75508 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN11O75508 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CLDN11O75508 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN11O75508 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN11O75508 HBZP1-201ENST00000354915 429 ntBASIC18.96■□□□□ 0.63
CLDN11O75508 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.96■□□□□ 0.63
CLDN11O75508 AC092597.1-201ENST00000487352 616 ntBASIC18.96■□□□□ 0.63
CLDN11O75508 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.96■□□□□ 0.63
CLDN11O75508 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
CLDN11O75508 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.96■□□□□ 0.63
CLDN11O75508 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN11O75508 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.96■□□□□ 0.63
CLDN11O75508 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN11O75508 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN11O75508 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CLDN11O75508 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN11O75508 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDN11O75508 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN11O75508 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN11O75508 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN11O75508 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN11O75508 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN11O75508 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDN11O75508 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CLDN11O75508 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDN11O75508 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN11O75508 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN11O75508 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN11O75508 PVRIG2P-201ENST00000435460 978 ntBASIC18.95■□□□□ 0.62
CLDN11O75508 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.95■□□□□ 0.62
CLDN11O75508 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.95■□□□□ 0.62
CLDN11O75508 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDN11O75508 ZNF444P1-201ENST00000559497 298 ntBASIC18.95■□□□□ 0.62
CLDN11O75508 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
CLDN11O75508 AC083849.1-201ENST00000615227 514 ntBASIC18.95■□□□□ 0.62
CLDN11O75508 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN11O75508 AC079602.3-201ENST00000623931 403 ntBASIC18.95■□□□□ 0.62
CLDN11O75508 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN11O75508 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CLDN11O75508 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN11O75508 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CLDN11O75508 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN11O75508 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN11O75508 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CLDN11O75508 AL499627.1-201ENST00000569373 2188 ntBASIC18.95■□□□□ 0.62
CLDN11O75508 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CLDN11O75508 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CLDN11O75508 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN11O75508 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN11O75508 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CLDN11O75508 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
CLDN11O75508 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN11O75508 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN11O75508 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN11O75508 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.94■□□□□ 0.62
CLDN11O75508 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN11O75508 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
CLDN11O75508 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN11O75508 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN11O75508 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN11O75508 HLA-F-220ENST00000434407 884 ntBASIC18.94■□□□□ 0.62
CLDN11O75508 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.94■□□□□ 0.62
CLDN11O75508 AL136038.4-201ENST00000603606 1261 ntBASIC18.94■□□□□ 0.62
CLDN11O75508 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CLDN11O75508 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.94■□□□□ 0.62
CLDN11O75508 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN11O75508 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms