Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 AL162741.1-201ENST00000565563 1558 ntBASIC19.34■□□□□ 0.69
LRCH4O75427 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH4O75427 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.34■□□□□ 0.69
LRCH4O75427 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.34■□□□□ 0.69
LRCH4O75427 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH4O75427 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH4O75427 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRCH4O75427 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
LRCH4O75427 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LRCH4O75427 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.33■□□□□ 0.69
LRCH4O75427 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRCH4O75427 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRCH4O75427 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LRCH4O75427 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRCH4O75427 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
LRCH4O75427 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRCH4O75427 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRCH4O75427 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.33■□□□□ 0.68
LRCH4O75427 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.33■□□□□ 0.68
LRCH4O75427 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.33■□□□□ 0.68
LRCH4O75427 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.33■□□□□ 0.68
LRCH4O75427 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.33■□□□□ 0.68
LRCH4O75427 NAPSB-206ENST00000562112 1266 ntBASIC19.33■□□□□ 0.68
LRCH4O75427 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.33■□□□□ 0.68
LRCH4O75427 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
LRCH4O75427 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
LRCH4O75427 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.33■□□□□ 0.68
LRCH4O75427 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRCH4O75427 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRCH4O75427 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
LRCH4O75427 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRCH4O75427 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRCH4O75427 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.33■□□□□ 0.68
LRCH4O75427 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.33■□□□□ 0.68
LRCH4O75427 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRCH4O75427 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
LRCH4O75427 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRCH4O75427 HOXB1-202ENST00000577092 1414 ntBASIC19.33■□□□□ 0.68
LRCH4O75427 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH4O75427 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
LRCH4O75427 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH4O75427 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH4O75427 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH4O75427 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH4O75427 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH4O75427 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH4O75427 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.32■□□□□ 0.68
LRCH4O75427 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH4O75427 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.32■□□□□ 0.68
LRCH4O75427 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LRCH4O75427 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.32■□□□□ 0.68
LRCH4O75427 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH4O75427 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH4O75427 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH4O75427 AC135776.1-201ENST00000319817 2481 ntBASIC19.32■□□□□ 0.68
LRCH4O75427 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH4O75427 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRCH4O75427 AC099343.3-201ENST00000605834 2503 ntBASIC19.31■□□□□ 0.68
LRCH4O75427 ABALON-201ENST00000629058 1903 ntBASIC19.31■□□□□ 0.68
LRCH4O75427 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH4O75427 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH4O75427 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LRCH4O75427 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.31■□□□□ 0.68
LRCH4O75427 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.31■□□□□ 0.68
LRCH4O75427 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH4O75427 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LRCH4O75427 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH4O75427 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH4O75427 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH4O75427 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.31■□□□□ 0.68
LRCH4O75427 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH4O75427 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH4O75427 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.31■□□□□ 0.68
LRCH4O75427 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH4O75427 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH4O75427 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH4O75427 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH4O75427 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH4O75427 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.31■□□□□ 0.68
LRCH4O75427 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
LRCH4O75427 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH4O75427 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH4O75427 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LRCH4O75427 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRCH4O75427 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LRCH4O75427 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.3■□□□□ 0.68
LRCH4O75427 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.3■□□□□ 0.68
LRCH4O75427 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.3■□□□□ 0.68
LRCH4O75427 ESPNP-201ENST00000270691 2015 ntBASIC19.3■□□□□ 0.68
LRCH4O75427 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH4O75427 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LRCH4O75427 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH4O75427 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH4O75427 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.3■□□□□ 0.68
LRCH4O75427 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH4O75427 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.3■□□□□ 0.68
LRCH4O75427 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.3■□□□□ 0.68
LRCH4O75427 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH4O75427 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRCH4O75427 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 280.5 ms