Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF40O75150 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF40O75150 AC104076.2-201ENST00000448912 469 ntBASIC20.03■□□□□ 0.8
RNF40O75150 B3GAT3P1-201ENST00000471720 806 ntBASIC20.03■□□□□ 0.8
RNF40O75150 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF40O75150 NTF6B-201ENST00000591913 560 ntBASIC20.03■□□□□ 0.8
RNF40O75150 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RNF40O75150 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF40O75150 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF40O75150 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF40O75150 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF40O75150 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF40O75150 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RNF40O75150 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RNF40O75150 AC116351.2-201ENST00000606540 1585 ntBASIC20.03■□□□□ 0.8
RNF40O75150 Z98044.1-201ENST00000632503 1764 ntBASIC20.03■□□□□ 0.8
RNF40O75150 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF40O75150 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF40O75150 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF40O75150 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF40O75150 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF40O75150 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.02■□□□□ 0.8
RNF40O75150 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF40O75150 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF40O75150 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF40O75150 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
RNF40O75150 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
RNF40O75150 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF40O75150 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RNF40O75150 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF40O75150 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF40O75150 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF40O75150 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.02■□□□□ 0.8
RNF40O75150 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.02■□□□□ 0.8
RNF40O75150 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RNF40O75150 LIN28AP1-201ENST00000429574 405 ntBASIC20.02■□□□□ 0.8
RNF40O75150 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF40O75150 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF40O75150 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF40O75150 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RNF40O75150 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF40O75150 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF40O75150 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RNF40O75150 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.02■□□□□ 0.79
RNF40O75150 AC106820.2-201ENST00000563775 3264 ntBASIC20.01■□□□□ 0.79
RNF40O75150 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF40O75150 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF40O75150 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF40O75150 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.01■□□□□ 0.79
RNF40O75150 TFP1-202ENST00000475455 1573 ntBASIC20.01■□□□□ 0.79
RNF40O75150 AC093525.10-201ENST00000625130 1569 ntBASIC20.01■□□□□ 0.79
RNF40O75150 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF40O75150 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF40O75150 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF40O75150 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF40O75150 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF40O75150 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RNF40O75150 YBX1P10-201ENST00000444752 975 ntBASIC20.01■□□□□ 0.79
RNF40O75150 ATP5G1P1-201ENST00000448724 379 ntBASIC20.01■□□□□ 0.79
RNF40O75150 AC011506.1-201ENST00000474329 610 ntBASIC20.01■□□□□ 0.79
RNF40O75150 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
RNF40O75150 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF40O75150 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF40O75150 AP005242.2-201ENST00000580065 1175 ntBASIC20.01■□□□□ 0.79
RNF40O75150 DGCR10-201ENST00000609839 495 ntBASIC20.01■□□□□ 0.79
RNF40O75150 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.01■□□□□ 0.79
RNF40O75150 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.01■□□□□ 0.79
RNF40O75150 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF40O75150 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RNF40O75150 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF40O75150 FP475955.4-201ENST00000623131 1990 ntBASIC20.01■□□□□ 0.79
RNF40O75150 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RNF40O75150 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF40O75150 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RNF40O75150 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RNF40O75150 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RNF40O75150 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RNF40O75150 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RNF40O75150 AC004980.1-204ENST00000429707 299 ntBASIC20■□□□□ 0.79
RNF40O75150 ECEL1P2-202ENST00000465689 757 ntBASIC20■□□□□ 0.79
RNF40O75150 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20■□□□□ 0.79
RNF40O75150 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20■□□□□ 0.79
RNF40O75150 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20■□□□□ 0.79
RNF40O75150 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RNF40O75150 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF40O75150 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RNF40O75150 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF40O75150 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RNF40O75150 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20■□□□□ 0.79
RNF40O75150 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF40O75150 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF40O75150 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF40O75150 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF40O75150 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20■□□□□ 0.79
RNF40O75150 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF40O75150 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
RNF40O75150 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF40O75150 AC018553.1-201ENST00000616682 1458 ntBASIC19.99■□□□□ 0.79
RNF40O75150 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF40O75150 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms