Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
BRD4O60885 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC25.67■■□□□ 1.7
BRD4O60885 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
BRD4O60885 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
BRD4O60885 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC25.67■■□□□ 1.7
BRD4O60885 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC25.67■■□□□ 1.7
BRD4O60885 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC25.67■■□□□ 1.7
BRD4O60885 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
BRD4O60885 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
BRD4O60885 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
BRD4O60885 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
BRD4O60885 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC25.67■■□□□ 1.7
BRD4O60885 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
BRD4O60885 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC25.67■■□□□ 1.7
BRD4O60885 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
BRD4O60885 DRAXINP1-201ENST00000437611 948 ntBASIC25.67■■□□□ 1.7
BRD4O60885 KRT17P6-201ENST00000453795 1220 ntBASIC25.67■■□□□ 1.7
BRD4O60885 NAA38-203ENST00000575071 553 ntTSL 2 BASIC25.67■■□□□ 1.7
BRD4O60885 RN7SL510P-201ENST00000581311 263 ntBASIC25.67■■□□□ 1.7
BRD4O60885 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
BRD4O60885 AL138781.2-201ENST00000617896 1843 ntBASIC25.67■■□□□ 1.7
BRD4O60885 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
BRD4O60885 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
BRD4O60885 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
BRD4O60885 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC25.66■■□□□ 1.7
BRD4O60885 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
BRD4O60885 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
BRD4O60885 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
BRD4O60885 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
BRD4O60885 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
BRD4O60885 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
BRD4O60885 AP002414.4-201ENST00000589764 1148 ntBASIC25.66■■□□□ 1.7
BRD4O60885 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
BRD4O60885 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
BRD4O60885 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC25.66■■□□□ 1.7
BRD4O60885 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
BRD4O60885 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC25.66■■□□□ 1.7
BRD4O60885 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
BRD4O60885 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
BRD4O60885 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
BRD4O60885 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
BRD4O60885 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
BRD4O60885 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
BRD4O60885 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
BRD4O60885 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
BRD4O60885 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
BRD4O60885 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC25.65■■□□□ 1.7
BRD4O60885 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC25.65■■□□□ 1.7
BRD4O60885 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC25.65■■□□□ 1.7
BRD4O60885 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC25.65■■□□□ 1.7
BRD4O60885 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
BRD4O60885 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC25.65■■□□□ 1.7
BRD4O60885 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
BRD4O60885 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
BRD4O60885 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC25.65■■□□□ 1.7
BRD4O60885 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
BRD4O60885 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC25.64■■□□□ 1.7
BRD4O60885 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
BRD4O60885 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.7
BRD4O60885 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
BRD4O60885 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
BRD4O60885 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC25.64■■□□□ 1.7
BRD4O60885 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
BRD4O60885 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
BRD4O60885 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
BRD4O60885 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
BRD4O60885 BAALC-202ENST00000306391 243 ntTSL 5 BASIC25.64■■□□□ 1.69
BRD4O60885 AC004870.1-201ENST00000315132 882 ntBASIC25.64■■□□□ 1.69
BRD4O60885 BAALC-204ENST00000330955 222 ntTSL 5 BASIC25.64■■□□□ 1.69
BRD4O60885 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
BRD4O60885 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC25.64■■□□□ 1.69
BRD4O60885 FDX1P1-201ENST00000449115 551 ntBASIC25.64■■□□□ 1.69
BRD4O60885 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC25.64■■□□□ 1.69
BRD4O60885 AC104390.1-201ENST00000555663 520 ntBASIC25.64■■□□□ 1.69
BRD4O60885 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC25.64■■□□□ 1.69
BRD4O60885 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC25.64■■□□□ 1.69
BRD4O60885 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC25.64■■□□□ 1.69
BRD4O60885 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC25.64■■□□□ 1.69
BRD4O60885 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
BRD4O60885 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC25.64■■□□□ 1.69
BRD4O60885 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
BRD4O60885 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.69
BRD4O60885 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
BRD4O60885 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC25.63■■□□□ 1.69
BRD4O60885 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC25.63■■□□□ 1.69
BRD4O60885 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
BRD4O60885 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
BRD4O60885 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC25.63■■□□□ 1.69
BRD4O60885 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC25.63■■□□□ 1.69
BRD4O60885 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC25.63■■□□□ 1.69
BRD4O60885 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
BRD4O60885 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
BRD4O60885 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
BRD4O60885 PPIH-202ENST00000372549 327 ntTSL 3 BASIC25.63■■□□□ 1.69
BRD4O60885 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC25.63■■□□□ 1.69
BRD4O60885 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC25.63■■□□□ 1.69
BRD4O60885 TPSP2-201ENST00000561760 610 ntBASIC25.63■■□□□ 1.69
BRD4O60885 MPI-205ENST00000562606 1052 ntTSL 3 BASIC25.63■■□□□ 1.69
BRD4O60885 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
BRD4O60885 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms