Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDH7O60245 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH7O60245 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH7O60245 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDH7O60245 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDH7O60245 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH7O60245 AL390961.4-201ENST00000623958 2535 ntBASIC17.77■□□□□ 0.44
PCDH7O60245 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH7O60245 GPAT2P1-201ENST00000444924 1672 ntBASIC17.77■□□□□ 0.44
PCDH7O60245 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH7O60245 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PCDH7O60245 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDH7O60245 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDH7O60245 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDH7O60245 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH7O60245 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH7O60245 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDH7O60245 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH7O60245 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH7O60245 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH7O60245 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PCDH7O60245 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH7O60245 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDH7O60245 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH7O60245 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
PCDH7O60245 MCCD1P1-208ENST00000445732 328 ntBASIC17.77■□□□□ 0.44
PCDH7O60245 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDH7O60245 CA15P1-201ENST00000481698 905 ntBASIC17.77■□□□□ 0.44
PCDH7O60245 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH7O60245 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.77■□□□□ 0.44
PCDH7O60245 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH7O60245 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH7O60245 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH7O60245 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH7O60245 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH7O60245 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH7O60245 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH7O60245 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH7O60245 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
PCDH7O60245 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
PCDH7O60245 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH7O60245 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH7O60245 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH7O60245 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH7O60245 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDH7O60245 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH7O60245 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDH7O60245 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH7O60245 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH7O60245 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDH7O60245 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH7O60245 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDH7O60245 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH7O60245 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PCDH7O60245 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH7O60245 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH7O60245 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH7O60245 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDH7O60245 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDH7O60245 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.76■□□□□ 0.43
PCDH7O60245 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDH7O60245 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDH7O60245 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH7O60245 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH7O60245 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH7O60245 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH7O60245 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PCDH7O60245 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH7O60245 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PCDH7O60245 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH7O60245 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH7O60245 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDH7O60245 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.76■□□□□ 0.43
PCDH7O60245 AC079598.2-202ENST00000546624 1451 ntBASIC17.75■□□□□ 0.43
PCDH7O60245 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH7O60245 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PCDH7O60245 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PCDH7O60245 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PCDH7O60245 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH7O60245 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH7O60245 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH7O60245 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDH7O60245 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH7O60245 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH7O60245 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH7O60245 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH7O60245 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDH7O60245 TSPY7P-201ENST00000431358 1114 ntBASIC17.75■□□□□ 0.43
PCDH7O60245 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH7O60245 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDH7O60245 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.75■□□□□ 0.43
PCDH7O60245 AP005242.2-201ENST00000580065 1175 ntBASIC17.75■□□□□ 0.43
PCDH7O60245 MIR4785-201ENST00000585005 73 ntBASIC17.75■□□□□ 0.43
PCDH7O60245 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.75■□□□□ 0.43
PCDH7O60245 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH7O60245 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH7O60245 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH7O60245 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH7O60245 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH7O60245 AL354751.1-201ENST00000412768 1863 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms