Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PROM1O43490 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PROM1O43490 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PROM1O43490 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PROM1O43490 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PROM1O43490 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PROM1O43490 AL499627.1-201ENST00000569373 2188 ntBASIC17.63■□□□□ 0.41
PROM1O43490 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PROM1O43490 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PROM1O43490 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PROM1O43490 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
PROM1O43490 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PROM1O43490 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.63■□□□□ 0.41
PROM1O43490 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PROM1O43490 ECEL1P2-202ENST00000465689 757 ntBASIC17.63■□□□□ 0.41
PROM1O43490 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.63■□□□□ 0.41
PROM1O43490 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
PROM1O43490 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PROM1O43490 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PROM1O43490 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PROM1O43490 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PROM1O43490 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PROM1O43490 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.63■□□□□ 0.41
PROM1O43490 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.63■□□□□ 0.41
PROM1O43490 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PROM1O43490 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PROM1O43490 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PROM1O43490 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PROM1O43490 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PROM1O43490 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PROM1O43490 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PROM1O43490 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.62■□□□□ 0.41
PROM1O43490 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PROM1O43490 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PROM1O43490 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PROM1O43490 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PROM1O43490 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PROM1O43490 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.62■□□□□ 0.41
PROM1O43490 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PROM1O43490 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PROM1O43490 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PROM1O43490 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PROM1O43490 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.62■□□□□ 0.41
PROM1O43490 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PROM1O43490 WWOX-216ENST00000569818 525 ntBASIC17.62■□□□□ 0.41
PROM1O43490 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.62■□□□□ 0.41
PROM1O43490 CR769767.2-201ENST00000622735 460 ntBASIC17.62■□□□□ 0.41
PROM1O43490 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PROM1O43490 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
PROM1O43490 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.62■□□□□ 0.41
PROM1O43490 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PROM1O43490 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PROM1O43490 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
PROM1O43490 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PROM1O43490 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PROM1O43490 KRT8P45-201ENST00000414328 1447 ntBASIC17.62■□□□□ 0.41
PROM1O43490 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PROM1O43490 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PROM1O43490 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PROM1O43490 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.62■□□□□ 0.41
PROM1O43490 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PROM1O43490 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PROM1O43490 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PROM1O43490 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.61■□□□□ 0.41
PROM1O43490 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
PROM1O43490 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.61■□□□□ 0.41
PROM1O43490 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PROM1O43490 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PROM1O43490 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.61■□□□□ 0.41
PROM1O43490 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PROM1O43490 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PROM1O43490 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PROM1O43490 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PROM1O43490 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
PROM1O43490 KRT18P41-201ENST00000518924 1277 ntBASIC17.61■□□□□ 0.41
PROM1O43490 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.61■□□□□ 0.41
PROM1O43490 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.61■□□□□ 0.41
PROM1O43490 AC145285.6-201ENST00000604632 637 ntBASIC17.61■□□□□ 0.41
PROM1O43490 FAM87A-204ENST00000613235 858 ntBASIC17.61■□□□□ 0.41
PROM1O43490 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PROM1O43490 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PROM1O43490 KRT18P22-201ENST00000402024 1347 ntBASIC17.61■□□□□ 0.41
PROM1O43490 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PROM1O43490 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
PROM1O43490 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PROM1O43490 AC112777.1-201ENST00000540175 1423 ntBASIC17.61■□□□□ 0.41
PROM1O43490 AC036111.1-201ENST00000533973 1582 ntBASIC17.61■□□□□ 0.41
PROM1O43490 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PROM1O43490 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PROM1O43490 AC034236.2-201ENST00000606662 1610 ntBASIC17.61■□□□□ 0.41
PROM1O43490 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.61■□□□□ 0.41
PROM1O43490 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.61■□□□□ 0.41
PROM1O43490 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
PROM1O43490 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.61■□□□□ 0.41
PROM1O43490 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PROM1O43490 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PROM1O43490 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PROM1O43490 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PROM1O43490 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.6■□□□□ 0.41
PROM1O43490 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms