Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.6■□□□□ 0.73
CLDN5O00501 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN5O00501 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CLDN5O00501 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.6■□□□□ 0.73
CLDN5O00501 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN5O00501 FAM86EP-206ENST00000510506 987 ntBASIC19.6■□□□□ 0.73
CLDN5O00501 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.6■□□□□ 0.73
CLDN5O00501 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.6■□□□□ 0.73
CLDN5O00501 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.6■□□□□ 0.73
CLDN5O00501 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN5O00501 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN5O00501 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
CLDN5O00501 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN5O00501 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN5O00501 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN5O00501 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.6■□□□□ 0.73
CLDN5O00501 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.6■□□□□ 0.73
CLDN5O00501 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CLDN5O00501 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN5O00501 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CLDN5O00501 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN5O00501 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN5O00501 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN5O00501 HBZP1-201ENST00000354915 429 ntBASIC19.59■□□□□ 0.73
CLDN5O00501 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
CLDN5O00501 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
CLDN5O00501 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN5O00501 VENTXP5-201ENST00000523979 775 ntBASIC19.59■□□□□ 0.73
CLDN5O00501 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.59■□□□□ 0.73
CLDN5O00501 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.59■□□□□ 0.73
CLDN5O00501 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN5O00501 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CLDN5O00501 AC005082.1-201ENST00000413042 2259 ntBASIC19.59■□□□□ 0.73
CLDN5O00501 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN5O00501 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN5O00501 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.58■□□□□ 0.73
CLDN5O00501 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN5O00501 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN5O00501 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN5O00501 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CLDN5O00501 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.73
CLDN5O00501 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN5O00501 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN5O00501 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
CLDN5O00501 KRT18P41-201ENST00000518924 1277 ntBASIC19.58■□□□□ 0.72
CLDN5O00501 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.58■□□□□ 0.72
CLDN5O00501 ZNF444P1-201ENST00000559497 298 ntBASIC19.58■□□□□ 0.72
CLDN5O00501 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CLDN5O00501 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN5O00501 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.58■□□□□ 0.72
CLDN5O00501 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN5O00501 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN5O00501 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CLDN5O00501 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN5O00501 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN5O00501 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CLDN5O00501 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CLDN5O00501 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN5O00501 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN5O00501 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN5O00501 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN5O00501 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN5O00501 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN5O00501 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN5O00501 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN5O00501 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.57■□□□□ 0.72
CLDN5O00501 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.57■□□□□ 0.72
CLDN5O00501 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN5O00501 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN5O00501 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CLDN5O00501 AL121956.5-201ENST00000625261 221 ntBASIC19.57■□□□□ 0.72
CLDN5O00501 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CLDN5O00501 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.57■□□□□ 0.72
CLDN5O00501 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN5O00501 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.57■□□□□ 0.72
CLDN5O00501 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CLDN5O00501 AL031598.1-201ENST00000561511 1773 ntBASIC19.57■□□□□ 0.72
CLDN5O00501 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CLDN5O00501 AC093525.10-201ENST00000625130 1569 ntBASIC19.57■□□□□ 0.72
CLDN5O00501 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.57■□□□□ 0.72
CLDN5O00501 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CLDN5O00501 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.56■□□□□ 0.72
CLDN5O00501 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CLDN5O00501 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CLDN5O00501 AC005332.1-201ENST00000577698 1310 ntBASIC19.56■□□□□ 0.72
CLDN5O00501 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN5O00501 AL391807.1-203ENST00000604392 2365 ntBASIC19.56■□□□□ 0.72
CLDN5O00501 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN5O00501 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN5O00501 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN5O00501 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN5O00501 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN5O00501 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.56■□□□□ 0.72
CLDN5O00501 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN5O00501 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN5O00501 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.56■□□□□ 0.72
CLDN5O00501 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN5O00501 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN5O00501 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CLDN5O00501 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms