Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.18■□□□□ 0.5
EIF3FO00303 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.18■□□□□ 0.5
EIF3FO00303 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.17■□□□□ 0.5
EIF3FO00303 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EIF3FO00303 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
EIF3FO00303 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
EIF3FO00303 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EIF3FO00303 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.17■□□□□ 0.5
EIF3FO00303 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EIF3FO00303 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
EIF3FO00303 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
EIF3FO00303 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.17■□□□□ 0.5
EIF3FO00303 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
EIF3FO00303 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EIF3FO00303 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EIF3FO00303 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
EIF3FO00303 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EIF3FO00303 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EIF3FO00303 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EIF3FO00303 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EIF3FO00303 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EIF3FO00303 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.17■□□□□ 0.5
EIF3FO00303 AC009065.1-201ENST00000564055 1225 ntBASIC18.17■□□□□ 0.5
EIF3FO00303 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.17■□□□□ 0.5
EIF3FO00303 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.17■□□□□ 0.5
EIF3FO00303 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EIF3FO00303 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.17■□□□□ 0.5
EIF3FO00303 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
EIF3FO00303 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EIF3FO00303 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
EIF3FO00303 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
EIF3FO00303 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.17■□□□□ 0.5
EIF3FO00303 FZD10-202ENST00000539839 3282 ntBASIC18.17■□□□□ 0.5
EIF3FO00303 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.16■□□□□ 0.5
EIF3FO00303 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.16■□□□□ 0.5
EIF3FO00303 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
EIF3FO00303 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
EIF3FO00303 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.16■□□□□ 0.5
EIF3FO00303 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
EIF3FO00303 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EIF3FO00303 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EIF3FO00303 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.16■□□□□ 0.5
EIF3FO00303 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EIF3FO00303 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EIF3FO00303 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.16■□□□□ 0.5
EIF3FO00303 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.16■□□□□ 0.5
EIF3FO00303 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EIF3FO00303 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EIF3FO00303 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.16■□□□□ 0.5
EIF3FO00303 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.16■□□□□ 0.5
EIF3FO00303 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.16■□□□□ 0.5
EIF3FO00303 KRT18P23-201ENST00000435622 1283 ntBASIC18.16■□□□□ 0.5
EIF3FO00303 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EIF3FO00303 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.16■□□□□ 0.5
EIF3FO00303 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.16■□□□□ 0.5
EIF3FO00303 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.16■□□□□ 0.5
EIF3FO00303 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.16■□□□□ 0.5
EIF3FO00303 FAM87A-204ENST00000613235 858 ntBASIC18.16■□□□□ 0.5
EIF3FO00303 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
EIF3FO00303 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EIF3FO00303 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EIF3FO00303 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
EIF3FO00303 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EIF3FO00303 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EIF3FO00303 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EIF3FO00303 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EIF3FO00303 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.16■□□□□ 0.5
EIF3FO00303 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
EIF3FO00303 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.15■□□□□ 0.5
EIF3FO00303 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
EIF3FO00303 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
EIF3FO00303 BICD1-207ENST00000551848 1962 ntBASIC18.15■□□□□ 0.5
EIF3FO00303 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EIF3FO00303 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.15■□□□□ 0.5
EIF3FO00303 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EIF3FO00303 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EIF3FO00303 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
EIF3FO00303 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EIF3FO00303 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EIF3FO00303 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
EIF3FO00303 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
EIF3FO00303 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.15■□□□□ 0.5
EIF3FO00303 NEK4P2-201ENST00000580004 1012 ntBASIC18.15■□□□□ 0.5
EIF3FO00303 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.15■□□□□ 0.5
EIF3FO00303 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.15■□□□□ 0.5
EIF3FO00303 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EIF3FO00303 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EIF3FO00303 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
EIF3FO00303 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EIF3FO00303 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
EIF3FO00303 KRT18P22-201ENST00000402024 1347 ntBASIC18.15■□□□□ 0.5
EIF3FO00303 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.15■□□□□ 0.5
EIF3FO00303 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
EIF3FO00303 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EIF3FO00303 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EIF3FO00303 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
EIF3FO00303 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
EIF3FO00303 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
EIF3FO00303 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
EIF3FO00303 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms