Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
AP3B1O00203 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
AP3B1O00203 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3B1O00203 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.8■□□□□ 0.6
AP3B1O00203 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
AP3B1O00203 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
AP3B1O00203 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3B1O00203 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
AP3B1O00203 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3B1O00203 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3B1O00203 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3B1O00203 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3B1O00203 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.79■□□□□ 0.6
AP3B1O00203 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.79■□□□□ 0.6
AP3B1O00203 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3B1O00203 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.79■□□□□ 0.6
AP3B1O00203 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.79■□□□□ 0.6
AP3B1O00203 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3B1O00203 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP3B1O00203 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP3B1O00203 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP3B1O00203 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
AP3B1O00203 CRYGFP-201ENST00000418459 633 ntBASIC18.79■□□□□ 0.6
AP3B1O00203 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP3B1O00203 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.79■□□□□ 0.6
AP3B1O00203 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3B1O00203 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
AP3B1O00203 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3B1O00203 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
AP3B1O00203 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3B1O00203 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3B1O00203 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3B1O00203 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.79■□□□□ 0.6
AP3B1O00203 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
AP3B1O00203 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
AP3B1O00203 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.78■□□□□ 0.6
AP3B1O00203 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3B1O00203 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3B1O00203 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
AP3B1O00203 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3B1O00203 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
AP3B1O00203 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3B1O00203 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3B1O00203 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP3B1O00203 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.78■□□□□ 0.6
AP3B1O00203 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP3B1O00203 SLC25A1P2-201ENST00000430693 912 ntBASIC18.78■□□□□ 0.6
AP3B1O00203 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.78■□□□□ 0.6
AP3B1O00203 MIR3180-5-201ENST00000583743 153 ntBASIC18.78■□□□□ 0.6
AP3B1O00203 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3B1O00203 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
AP3B1O00203 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
AP3B1O00203 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.78■□□□□ 0.6
AP3B1O00203 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP3B1O00203 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
AP3B1O00203 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP3B1O00203 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP3B1O00203 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.78■□□□□ 0.6
AP3B1O00203 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.78■□□□□ 0.6
AP3B1O00203 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
AP3B1O00203 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.78■□□□□ 0.6
AP3B1O00203 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
AP3B1O00203 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP3B1O00203 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
AP3B1O00203 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP3B1O00203 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
AP3B1O00203 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
AP3B1O00203 KRT8P7-201ENST00000533003 1432 ntBASIC18.77■□□□□ 0.6
AP3B1O00203 GPAT2P1-201ENST00000444924 1672 ntBASIC18.77■□□□□ 0.6
AP3B1O00203 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP3B1O00203 UNC93B2-201ENST00000285383 730 ntBASIC18.77■□□□□ 0.6
AP3B1O00203 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP3B1O00203 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
AP3B1O00203 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
AP3B1O00203 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.77■□□□□ 0.6
AP3B1O00203 TSPY17P-201ENST00000450329 467 ntBASIC18.77■□□□□ 0.6
AP3B1O00203 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.77■□□□□ 0.6
AP3B1O00203 MIR4785-201ENST00000585005 73 ntBASIC18.77■□□□□ 0.6
AP3B1O00203 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP3B1O00203 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP3B1O00203 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP3B1O00203 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
AP3B1O00203 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.77■□□□□ 0.6
AP3B1O00203 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.77■□□□□ 0.59
AP3B1O00203 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
AP3B1O00203 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
AP3B1O00203 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
AP3B1O00203 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
AP3B1O00203 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.77■□□□□ 0.59
AP3B1O00203 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3B1O00203 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3B1O00203 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.76■□□□□ 0.59
AP3B1O00203 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3B1O00203 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3B1O00203 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3B1O00203 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3B1O00203 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
AP3B1O00203 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.76■□□□□ 0.59
AP3B1O00203 AP003071.4-201ENST00000562276 1284 ntBASIC18.76■□□□□ 0.59
AP3B1O00203 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms