Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 AC018695.7-201ENST00000624587 2492 ntBASIC20.07■□□□□ 0.8
USP27XA6NNY8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC20.06■□□□□ 0.8
USP27XA6NNY8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP27XA6NNY8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
USP27XA6NNY8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP27XA6NNY8 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP27XA6NNY8 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP27XA6NNY8 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP27XA6NNY8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
USP27XA6NNY8 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP27XA6NNY8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.06■□□□□ 0.8
USP27XA6NNY8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
USP27XA6NNY8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP27XA6NNY8 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP27XA6NNY8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.06■□□□□ 0.8
USP27XA6NNY8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.06■□□□□ 0.8
USP27XA6NNY8 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP27XA6NNY8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
USP27XA6NNY8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.06■□□□□ 0.8
USP27XA6NNY8 AP001094.4-201ENST00000579008 2176 ntBASIC20.06■□□□□ 0.8
USP27XA6NNY8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
USP27XA6NNY8 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP27XA6NNY8 AL139384.1-201ENST00000612143 3047 ntBASIC20.06■□□□□ 0.8
USP27XA6NNY8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
USP27XA6NNY8 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
USP27XA6NNY8 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP27XA6NNY8 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
USP27XA6NNY8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
USP27XA6NNY8 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP27XA6NNY8 KRT8P32-201ENST00000512863 1461 ntBASIC20.05■□□□□ 0.8
USP27XA6NNY8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC20.05■□□□□ 0.8
USP27XA6NNY8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP27XA6NNY8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP27XA6NNY8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
USP27XA6NNY8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP27XA6NNY8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP27XA6NNY8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.05■□□□□ 0.8
USP27XA6NNY8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.05■□□□□ 0.8
USP27XA6NNY8 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.05■□□□□ 0.8
USP27XA6NNY8 AC112777.1-201ENST00000540175 1423 ntBASIC20.05■□□□□ 0.8
USP27XA6NNY8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP27XA6NNY8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.05■□□□□ 0.8
USP27XA6NNY8 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.05■□□□□ 0.8
USP27XA6NNY8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
USP27XA6NNY8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.05■□□□□ 0.8
USP27XA6NNY8 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.05■□□□□ 0.8
USP27XA6NNY8 AL162430.1-201ENST00000480705 870 ntBASIC20.05■□□□□ 0.8
USP27XA6NNY8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.05■□□□□ 0.8
USP27XA6NNY8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.05■□□□□ 0.8
USP27XA6NNY8 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.05■□□□□ 0.8
USP27XA6NNY8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP27XA6NNY8 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.05■□□□□ 0.8
USP27XA6NNY8 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.05■□□□□ 0.8
USP27XA6NNY8 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.05■□□□□ 0.8
USP27XA6NNY8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.05■□□□□ 0.8
USP27XA6NNY8 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP27XA6NNY8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP27XA6NNY8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
USP27XA6NNY8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP27XA6NNY8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP27XA6NNY8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP27XA6NNY8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP27XA6NNY8 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.05■□□□□ 0.8
USP27XA6NNY8 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
USP27XA6NNY8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
USP27XA6NNY8 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
USP27XA6NNY8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP27XA6NNY8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP27XA6NNY8 AC006116.8-202ENST00000587620 1550 ntBASIC20.04■□□□□ 0.8
USP27XA6NNY8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
USP27XA6NNY8 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP27XA6NNY8 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.04■□□□□ 0.8
USP27XA6NNY8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP27XA6NNY8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP27XA6NNY8 AC008894.3-201ENST00000624324 3103 ntBASIC20.04■□□□□ 0.8
USP27XA6NNY8 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP27XA6NNY8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
USP27XA6NNY8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP27XA6NNY8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
USP27XA6NNY8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
USP27XA6NNY8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.04■□□□□ 0.8
USP27XA6NNY8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.04■□□□□ 0.8
USP27XA6NNY8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.04■□□□□ 0.8
USP27XA6NNY8 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.04■□□□□ 0.8
USP27XA6NNY8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.04■□□□□ 0.8
USP27XA6NNY8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
USP27XA6NNY8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP27XA6NNY8 AL096828.2-201ENST00000567259 1965 ntBASIC20.04■□□□□ 0.8
USP27XA6NNY8 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP27XA6NNY8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP27XA6NNY8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.04■□□□□ 0.8
USP27XA6NNY8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP27XA6NNY8 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
USP27XA6NNY8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.04■□□□□ 0.8
USP27XA6NNY8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
USP27XA6NNY8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
USP27XA6NNY8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP27XA6NNY8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
USP27XA6NNY8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
USP27XA6NNY8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms