Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01546A6NGU7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC13.12□□□□□ -0.31
LINC01546A6NGU7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC01546A6NGU7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.12□□□□□ -0.31
LINC01546A6NGU7 AL160286.2-201ENST00000567150 934 ntBASIC13.12□□□□□ -0.31
LINC01546A6NGU7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC01546A6NGU7 OR10C1-204ENST00000622521 1039 ntBASIC13.12□□□□□ -0.31
LINC01546A6NGU7 AC008694.1-202ENST00000636953 945 ntBASIC13.12□□□□□ -0.31
LINC01546A6NGU7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01546A6NGU7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
LINC01546A6NGU7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01546A6NGU7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
LINC01546A6NGU7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LINC01546A6NGU7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
LINC01546A6NGU7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01546A6NGU7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01546A6NGU7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.12□□□□□ -0.31
LINC01546A6NGU7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.12□□□□□ -0.31
LINC01546A6NGU7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01546A6NGU7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
LINC01546A6NGU7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01546A6NGU7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01546A6NGU7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
LINC01546A6NGU7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
LINC01546A6NGU7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01546A6NGU7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01546A6NGU7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01546A6NGU7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 AL512625.2-201ENST00000417533 625 ntBASIC13.11□□□□□ -0.31
LINC01546A6NGU7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 SP2-202ENST00000613139 908 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 HTR7P1-201ENST00000538670 1336 ntBASIC13.11□□□□□ -0.31
LINC01546A6NGU7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01546A6NGU7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 AL391005.1-201ENST00000623953 2435 ntBASIC13.1□□□□□ -0.31
LINC01546A6NGU7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.1□□□□□ -0.31
LINC01546A6NGU7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms