Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 TSPY21P-201ENST00000433481 731 ntBASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 AC012313.1-201ENST00000593393 3059 ntBASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RNF103-CHMP3A0A140T963 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF103-CHMP3A0A140T963 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 ESRRAP1-201ENST00000400596 1257 ntBASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF103-CHMP3A0A140T963 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RNF103-CHMP3A0A140T963 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms