Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV5A0A0B4J249 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV5A0A0B4J249 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.46□□□□□ -0.1
TRAV5A0A0B4J249 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV5A0A0B4J249 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
TRAV5A0A0B4J249 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV5A0A0B4J249 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV5A0A0B4J249 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.46□□□□□ -0.1
TRAV5A0A0B4J249 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 NBPF21P-201ENST00000425093 1451 ntBASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 NCF1B-203ENST00000435988 1254 ntBASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 PRKY-204ENST00000533551 1019 ntBASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 AL138781.1-201ENST00000566567 1274 ntBASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 C1QL1P1-201ENST00000568105 661 ntBASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 LINC00896-202ENST00000609602 2128 ntBASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
TRAV5A0A0B4J249 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 AC139713.2-201ENST00000641328 2723 ntBASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC14.44□□□□□ -0.1
TRAV5A0A0B4J249 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms