Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC187A0A096LP49 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 AL353692.3-201ENST00000407031 1396 ntBASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 NUS1P2-201ENST00000417358 873 ntBASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.59■□□□□ 0.41
CCDC187A0A096LP49 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC187A0A096LP49 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC187A0A096LP49 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.58■□□□□ 0.41
CCDC187A0A096LP49 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC187A0A096LP49 TREX1-205ENST00000625293 1783 ntBASIC17.58■□□□□ 0.41
CCDC187A0A096LP49 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CCDC187A0A096LP49 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC187A0A096LP49 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC187A0A096LP49 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.58■□□□□ 0.41
CCDC187A0A096LP49 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 AKR1C7P-201ENST00000305623 895 ntBASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 AC064862.7-201ENST00000604520 867 ntBASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 AC006538.3-201ENST00000612495 578 ntBASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 REXO1L6P-202ENST00000619970 1078 ntBASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 IRX1P1-201ENST00000438849 1838 ntBASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
CCDC187A0A096LP49 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 HLA-A-201ENST00000376802 1334 ntBASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 MINOS1P3-201ENST00000457048 203 ntBASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 AC011840.4-201ENST00000578471 627 ntBASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 AC120114.3-201ENST00000611923 658 ntBASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC187A0A096LP49 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms