Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLIC4Q9Y696 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.26■□□□□ 0.99
CLIC4Q9Y696 MYLKP1-201ENST00000509077 1580 ntBASIC21.26■□□□□ 0.99
CLIC4Q9Y696 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.26■□□□□ 0.99
CLIC4Q9Y696 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLIC4Q9Y696 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLIC4Q9Y696 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.26■□□□□ 0.99
CLIC4Q9Y696 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CLIC4Q9Y696 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLIC4Q9Y696 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CLIC4Q9Y696 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
CLIC4Q9Y696 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC4Q9Y696 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC4Q9Y696 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.25■□□□□ 0.99
CLIC4Q9Y696 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.25■□□□□ 0.99
CLIC4Q9Y696 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.25■□□□□ 0.99
CLIC4Q9Y696 AC026471.1-201ENST00000564629 3026 ntBASIC21.25■□□□□ 0.99
CLIC4Q9Y696 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC4Q9Y696 ESPNP-201ENST00000270691 2015 ntBASIC21.25■□□□□ 0.99
CLIC4Q9Y696 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC4Q9Y696 MIR564-202ENST00000385049 94 ntBASIC21.25■□□□□ 0.99
CLIC4Q9Y696 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC21.25■□□□□ 0.99
CLIC4Q9Y696 AL355355.2-201ENST00000442321 338 ntBASIC21.25■□□□□ 0.99
CLIC4Q9Y696 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.25■□□□□ 0.99
CLIC4Q9Y696 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.25■□□□□ 0.99
CLIC4Q9Y696 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.25■□□□□ 0.99
CLIC4Q9Y696 AL162741.1-201ENST00000565563 1558 ntBASIC21.25■□□□□ 0.99
CLIC4Q9Y696 MIR4674-201ENST00000582457 87 ntBASIC21.25■□□□□ 0.99
CLIC4Q9Y696 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.25■□□□□ 0.99
CLIC4Q9Y696 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.25■□□□□ 0.99
CLIC4Q9Y696 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC4Q9Y696 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC4Q9Y696 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC4Q9Y696 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC4Q9Y696 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC4Q9Y696 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CLIC4Q9Y696 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.24■□□□□ 0.99
CLIC4Q9Y696 AC099343.3-201ENST00000605834 2503 ntBASIC21.24■□□□□ 0.99
CLIC4Q9Y696 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLIC4Q9Y696 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLIC4Q9Y696 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC21.24■□□□□ 0.99
CLIC4Q9Y696 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLIC4Q9Y696 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.24■□□□□ 0.99
CLIC4Q9Y696 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLIC4Q9Y696 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.24■□□□□ 0.99
CLIC4Q9Y696 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.24■□□□□ 0.99
CLIC4Q9Y696 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.24■□□□□ 0.99
CLIC4Q9Y696 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.24■□□□□ 0.99
CLIC4Q9Y696 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.24■□□□□ 0.99
CLIC4Q9Y696 AP001412.1-201ENST00000608405 714 ntBASIC21.24■□□□□ 0.99
CLIC4Q9Y696 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.24■□□□□ 0.99
CLIC4Q9Y696 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.24■□□□□ 0.99
CLIC4Q9Y696 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLIC4Q9Y696 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CLIC4Q9Y696 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.24■□□□□ 0.99
CLIC4Q9Y696 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.24■□□□□ 0.99
CLIC4Q9Y696 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLIC4Q9Y696 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC21.24■□□□□ 0.99
CLIC4Q9Y696 AC068880.1-201ENST00000507289 2297 ntBASIC21.24■□□□□ 0.99
CLIC4Q9Y696 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLIC4Q9Y696 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.23■□□□□ 0.99
CLIC4Q9Y696 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLIC4Q9Y696 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLIC4Q9Y696 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLIC4Q9Y696 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLIC4Q9Y696 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLIC4Q9Y696 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.23■□□□□ 0.99
CLIC4Q9Y696 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLIC4Q9Y696 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLIC4Q9Y696 MCCD1P1-208ENST00000445732 328 ntBASIC21.23■□□□□ 0.99
CLIC4Q9Y696 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC21.23■□□□□ 0.99
CLIC4Q9Y696 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLIC4Q9Y696 KRT18P41-201ENST00000518924 1277 ntBASIC21.23■□□□□ 0.99
CLIC4Q9Y696 AP003071.4-201ENST00000562276 1284 ntBASIC21.23■□□□□ 0.99
CLIC4Q9Y696 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLIC4Q9Y696 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLIC4Q9Y696 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.23■□□□□ 0.99
CLIC4Q9Y696 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CLIC4Q9Y696 NOC2LP2-201ENST00000407594 1944 ntBASIC21.23■□□□□ 0.99
CLIC4Q9Y696 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.23■□□□□ 0.99
CLIC4Q9Y696 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.23■□□□□ 0.99
CLIC4Q9Y696 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLIC4Q9Y696 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.22■□□□□ 0.99
CLIC4Q9Y696 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms