Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 SPDYE15P-201ENST00000424157 909 ntBASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 RASA4DP-201ENST00000460726 1199 ntBASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 AC069148.1-201ENST00000608741 768 ntBASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 AC024243.1-201ENST00000609234 778 ntBASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 AC083849.1-201ENST00000615227 514 ntBASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TSSC4Q9Y5U2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.55□□□□□ -0.08
TSSC4Q9Y5U2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TSSC4Q9Y5U2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TSSC4Q9Y5U2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
TSSC4Q9Y5U2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
TSSC4Q9Y5U2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TSSC4Q9Y5U2 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TSSC4Q9Y5U2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TSSC4Q9Y5U2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TSSC4Q9Y5U2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TSSC4Q9Y5U2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TSSC4Q9Y5U2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TSSC4Q9Y5U2 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
TSSC4Q9Y5U2 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TSSC4Q9Y5U2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TSSC4Q9Y5U2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TSSC4Q9Y5U2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TSSC4Q9Y5U2 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TSSC4Q9Y5U2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms