Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 PCDHB18P-201ENST00000524813 2368 ntBASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 AL513477.1-201ENST00000602865 2407 ntBASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.38■□□□□ 0.53
PCDHGA4Q9Y5G9 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 AC091390.4-202ENST00000476426 537 ntBASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 AC011298.2-201ENST00000617989 482 ntBASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PCDHGA4Q9Y5G9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 FAM8A6P-201ENST00000407496 1135 ntBASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 BNIP3P41-202ENST00000616656 861 ntBASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 AC130371.2-201ENST00000619443 611 ntBASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHGA4Q9Y5G9 MST1L-201ENST00000442552 2185 ntBASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 TEX21P-204ENST00000641479 1693 ntBASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 RNF152P1-201ENST00000397754 604 ntBASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 AC008040.2-201ENST00000461049 708 ntBASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 AC139887.4-201ENST00000607877 719 ntBASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGA4Q9Y5G9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms