Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
PCDHB7Q9Y5E2 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB7Q9Y5E2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.01■□□□□ 0.79
PCDHB7Q9Y5E2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB7Q9Y5E2 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB7Q9Y5E2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.01■□□□□ 0.79
PCDHB7Q9Y5E2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDHB7Q9Y5E2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHB7Q9Y5E2 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHB7Q9Y5E2 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
PCDHB7Q9Y5E2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PCDHB7Q9Y5E2 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
PCDHB7Q9Y5E2 AC099336.1-202ENST00000602961 463 ntBASIC20.01■□□□□ 0.79
PCDHB7Q9Y5E2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB7Q9Y5E2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB7Q9Y5E2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDHB7Q9Y5E2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB7Q9Y5E2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB7Q9Y5E2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB7Q9Y5E2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHB7Q9Y5E2 AL158211.5-201ENST00000623583 2518 ntBASIC20.01■□□□□ 0.79
PCDHB7Q9Y5E2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB7Q9Y5E2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB7Q9Y5E2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB7Q9Y5E2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB7Q9Y5E2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PCDHB7Q9Y5E2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHB7Q9Y5E2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB7Q9Y5E2 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB7Q9Y5E2 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB7Q9Y5E2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20■□□□□ 0.79
PCDHB7Q9Y5E2 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20■□□□□ 0.79
PCDHB7Q9Y5E2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20■□□□□ 0.79
PCDHB7Q9Y5E2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20■□□□□ 0.79
PCDHB7Q9Y5E2 AC009078.2-202ENST00000463353 338 ntBASIC20■□□□□ 0.79
PCDHB7Q9Y5E2 AL160237.2-201ENST00000556165 472 ntBASIC20■□□□□ 0.79
PCDHB7Q9Y5E2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20■□□□□ 0.79
PCDHB7Q9Y5E2 AL592071.1-201ENST00000611956 408 ntBASIC20■□□□□ 0.79
PCDHB7Q9Y5E2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHB7Q9Y5E2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PCDHB7Q9Y5E2 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHB7Q9Y5E2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20■□□□□ 0.79
PCDHB7Q9Y5E2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20■□□□□ 0.79
PCDHB7Q9Y5E2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20■□□□□ 0.79
PCDHB7Q9Y5E2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHB7Q9Y5E2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 VENTXP7-201ENST00000475503 772 ntBASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 AC104692.2-201ENST00000603054 253 ntBASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 AL357033.4-201ENST00000617703 1807 ntBASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHB7Q9Y5E2 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB7Q9Y5E2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB7Q9Y5E2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHB7Q9Y5E2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB7Q9Y5E2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB7Q9Y5E2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB7Q9Y5E2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
PCDHB7Q9Y5E2 AC079781.3-201ENST00000449110 356 ntBASIC19.98■□□□□ 0.79
PCDHB7Q9Y5E2 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHB7Q9Y5E2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB7Q9Y5E2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB7Q9Y5E2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDHB7Q9Y5E2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.98■□□□□ 0.79
PCDHB7Q9Y5E2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB7Q9Y5E2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.98■□□□□ 0.79
PCDHB7Q9Y5E2 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB7Q9Y5E2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB7Q9Y5E2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PCDHB7Q9Y5E2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB7Q9Y5E2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB7Q9Y5E2 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PCDHB7Q9Y5E2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDHB7Q9Y5E2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms