Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 AL596257.1-201ENST00000641463 2694 ntBASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRCH1Q9Y2L9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
LRCH1Q9Y2L9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 PCDH8P1-201ENST00000428983 2773 ntBASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 SDHAP1-207ENST00000440850 2000 ntBASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 BID-214ENST00000617586 542 ntTSL 5 BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LRCH1Q9Y2L9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms