Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 ARMC10P1-201ENST00000313754 855 ntBASIC17.54■□□□□ 0.4
RNF6Q9Y252 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
RNF6Q9Y252 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.54■□□□□ 0.4
RNF6Q9Y252 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
RNF6Q9Y252 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF6Q9Y252 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF6Q9Y252 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF6Q9Y252 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF6Q9Y252 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.54■□□□□ 0.4
RNF6Q9Y252 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.54■□□□□ 0.4
RNF6Q9Y252 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF6Q9Y252 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RNF6Q9Y252 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RNF6Q9Y252 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
RNF6Q9Y252 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF6Q9Y252 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF6Q9Y252 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RNF6Q9Y252 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF6Q9Y252 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF6Q9Y252 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.54■□□□□ 0.4
RNF6Q9Y252 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RNF6Q9Y252 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF6Q9Y252 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF6Q9Y252 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF6Q9Y252 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF6Q9Y252 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF6Q9Y252 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF6Q9Y252 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF6Q9Y252 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF6Q9Y252 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RNF6Q9Y252 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF6Q9Y252 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF6Q9Y252 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF6Q9Y252 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF6Q9Y252 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.53■□□□□ 0.4
RNF6Q9Y252 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.53■□□□□ 0.4
RNF6Q9Y252 FITM1-202ENST00000559294 800 ntBASIC17.53■□□□□ 0.4
RNF6Q9Y252 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.53■□□□□ 0.4
RNF6Q9Y252 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF6Q9Y252 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF6Q9Y252 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF6Q9Y252 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF6Q9Y252 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF6Q9Y252 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF6Q9Y252 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF6Q9Y252 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF6Q9Y252 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF6Q9Y252 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.53■□□□□ 0.4
RNF6Q9Y252 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RNF6Q9Y252 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF6Q9Y252 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF6Q9Y252 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.52■□□□□ 0.4
RNF6Q9Y252 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RNF6Q9Y252 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF6Q9Y252 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RNF6Q9Y252 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF6Q9Y252 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF6Q9Y252 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF6Q9Y252 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF6Q9Y252 CYP2D8P-201ENST00000433633 1490 ntBASIC17.52■□□□□ 0.4
RNF6Q9Y252 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RNF6Q9Y252 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF6Q9Y252 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF6Q9Y252 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RNF6Q9Y252 AC113347.1-201ENST00000413321 391 ntBASIC17.52■□□□□ 0.4
RNF6Q9Y252 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.52■□□□□ 0.4
RNF6Q9Y252 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF6Q9Y252 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.52■□□□□ 0.4
RNF6Q9Y252 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.52■□□□□ 0.4
RNF6Q9Y252 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.52■□□□□ 0.4
RNF6Q9Y252 AL590326.2-201ENST00000625139 305 ntBASIC17.52■□□□□ 0.4
RNF6Q9Y252 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
RNF6Q9Y252 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RNF6Q9Y252 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF6Q9Y252 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RNF6Q9Y252 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.52■□□□□ 0.39
RNF6Q9Y252 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.52■□□□□ 0.39
RNF6Q9Y252 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF6Q9Y252 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.52■□□□□ 0.39
RNF6Q9Y252 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF6Q9Y252 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.52■□□□□ 0.39
RNF6Q9Y252 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
RNF6Q9Y252 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF6Q9Y252 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
RNF6Q9Y252 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RNF6Q9Y252 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF6Q9Y252 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RNF6Q9Y252 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF6Q9Y252 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF6Q9Y252 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
RNF6Q9Y252 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
RNF6Q9Y252 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF6Q9Y252 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF6Q9Y252 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
RNF6Q9Y252 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RNF6Q9Y252 KRT18P22-201ENST00000402024 1347 ntBASIC17.51■□□□□ 0.39
RNF6Q9Y252 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RNF6Q9Y252 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.51■□□□□ 0.39
RNF6Q9Y252 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RNF6Q9Y252 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms