Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 SIRPAP1-201ENST00000448467 1770 ntBASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 AC104417.2-201ENST00000562989 1793 ntBASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 AC008764.6-201ENST00000595909 2069 ntBASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 C1QL1P1-201ENST00000568105 661 ntBASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.62□□□□□ -0.23
HHLA3Q9XRX5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 RNF121-214ENST00000533380 870 ntTSL 3 BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 HTR7P1-202ENST00000624664 4411 ntBASIC13.61□□□□□ -0.23
HHLA3Q9XRX5 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
HHLA3Q9XRX5 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms