Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB4Q9UN71 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHGB4Q9UN71 TSPY21P-201ENST00000433481 731 ntBASIC18.06■□□□□ 0.48
PCDHGB4Q9UN71 AL160286.2-201ENST00000567150 934 ntBASIC18.06■□□□□ 0.48
PCDHGB4Q9UN71 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.06■□□□□ 0.48
PCDHGB4Q9UN71 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHGB4Q9UN71 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB4Q9UN71 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB4Q9UN71 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
PCDHGB4Q9UN71 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.06■□□□□ 0.48
PCDHGB4Q9UN71 Z98044.1-201ENST00000632503 1764 ntBASIC18.06■□□□□ 0.48
PCDHGB4Q9UN71 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
PCDHGB4Q9UN71 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB4Q9UN71 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PCDHGB4Q9UN71 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB4Q9UN71 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB4Q9UN71 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB4Q9UN71 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCDHGB4Q9UN71 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 AC093525.10-201ENST00000625130 1569 ntBASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCDHGB4Q9UN71 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 RNA5SP413-201ENST00000516373 109 ntBASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 AP003097.1-201ENST00000530657 1135 ntBASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 PCDHA12-202ENST00000613593 2588 ntBASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 AL512353.2-201ENST00000448759 1962 ntBASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 TNRC18P3-201ENST00000441896 2691 ntBASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
PCDHGB4Q9UN71 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCDHGB4Q9UN71 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms