Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
MKKSQ9NPJ1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MKKSQ9NPJ1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.62■□□□□ 0.41
MKKSQ9NPJ1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 MIR564-202ENST00000385049 94 ntBASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 AC034232.1-201ENST00000506026 1064 ntBASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 AC112497.1-201ENST00000624824 639 ntBASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 AC068587.9-201ENST00000641814 219 ntBASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
MKKSQ9NPJ1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 STARP1-201ENST00000397973 869 ntBASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 AL359075.1-203ENST00000462729 1002 ntBASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 MYC-208ENST00000641036 567 ntBASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MKKSQ9NPJ1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 HEIH-201ENST00000623091 1652 ntBASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 HOXB1-202ENST00000577092 1414 ntBASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 AC024243.1-201ENST00000609234 778 ntBASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.59■□□□□ 0.41
MKKSQ9NPJ1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
MKKSQ9NPJ1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms