Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 AL355472.2-201ENST00000422958 438 ntBASIC16.92■□□□□ 0.3
HMG20AQ9NP66 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 KRT8P17-201ENST00000453110 1448 ntBASIC16.92■□□□□ 0.3
HMG20AQ9NP66 AC010980.2-201ENST00000587099 1412 ntBASIC16.92■□□□□ 0.3
HMG20AQ9NP66 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.92■□□□□ 0.3
HMG20AQ9NP66 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 AL512625.2-201ENST00000417533 625 ntBASIC16.91■□□□□ 0.3
HMG20AQ9NP66 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 AC005181.1-201ENST00000604782 1256 ntBASIC16.91■□□□□ 0.3
HMG20AQ9NP66 AL589743.5-201ENST00000616611 1050 ntBASIC16.91■□□□□ 0.3
HMG20AQ9NP66 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 AL118508.1-201ENST00000613502 2345 ntBASIC16.91■□□□□ 0.3
HMG20AQ9NP66 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMG20AQ9NP66 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 AC004911.1-201ENST00000416316 871 ntBASIC16.9■□□□□ 0.3
HMG20AQ9NP66 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 AC092437.1-201ENST00000624794 1048 ntBASIC16.9■□□□□ 0.3
HMG20AQ9NP66 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 AC008894.3-201ENST00000624324 3103 ntBASIC16.9■□□□□ 0.3
HMG20AQ9NP66 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 OR6D1P-203ENST00000641209 4860 ntBASIC16.9■□□□□ 0.3
HMG20AQ9NP66 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HMG20AQ9NP66 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms