Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDCP1Q9H5V8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCP1Q9H5V8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.35■□□□□ 0.37
CDCP1Q9H5V8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.35■□□□□ 0.37
CDCP1Q9H5V8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CDCP1Q9H5V8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDCP1Q9H5V8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCP1Q9H5V8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CDCP1Q9H5V8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.35■□□□□ 0.37
CDCP1Q9H5V8 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCP1Q9H5V8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.35■□□□□ 0.37
CDCP1Q9H5V8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCP1Q9H5V8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CDCP1Q9H5V8 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.35■□□□□ 0.37
CDCP1Q9H5V8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCP1Q9H5V8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDCP1Q9H5V8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
CDCP1Q9H5V8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCP1Q9H5V8 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 RCC2P3-201ENST00000418112 1537 ntBASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 KRT18P38-201ENST00000449496 1282 ntBASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 MYC-208ENST00000641036 567 ntBASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDCP1Q9H5V8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
CDCP1Q9H5V8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.33■□□□□ 0.37
CDCP1Q9H5V8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.33■□□□□ 0.37
CDCP1Q9H5V8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDCP1Q9H5V8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDCP1Q9H5V8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.33■□□□□ 0.37
CDCP1Q9H5V8 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDCP1Q9H5V8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDCP1Q9H5V8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDCP1Q9H5V8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDCP1Q9H5V8 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.33■□□□□ 0.37
CDCP1Q9H5V8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CDCP1Q9H5V8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDCP1Q9H5V8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDCP1Q9H5V8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CDCP1Q9H5V8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CDCP1Q9H5V8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDCP1Q9H5V8 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDCP1Q9H5V8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCP1Q9H5V8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCP1Q9H5V8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDCP1Q9H5V8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCP1Q9H5V8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCP1Q9H5V8 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.33■□□□□ 0.36
CDCP1Q9H5V8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CDCP1Q9H5V8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.33■□□□□ 0.36
CDCP1Q9H5V8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.33■□□□□ 0.36
CDCP1Q9H5V8 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCP1Q9H5V8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDCP1Q9H5V8 AC024243.1-201ENST00000609234 778 ntBASIC17.33■□□□□ 0.36
CDCP1Q9H5V8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCP1Q9H5V8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CDCP1Q9H5V8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDCP1Q9H5V8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDCP1Q9H5V8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.33■□□□□ 0.36
CDCP1Q9H5V8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDCP1Q9H5V8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDCP1Q9H5V8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CDCP1Q9H5V8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDCP1Q9H5V8 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms