Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
POLR2J3Q9H1A7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 MTMR9LP-203ENST00000426597 1545 ntBASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
POLR2J3Q9H1A7 AC112777.1-201ENST00000540175 1423 ntBASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 AC004951.3-201ENST00000418645 1148 ntBASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
POLR2J3Q9H1A7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
POLR2J3Q9H1A7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms