Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCSER1Q9C0I3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCSER1Q9C0I3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCSER1Q9C0I3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.82■□□□□ 0.92
CCSER1Q9C0I3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCSER1Q9C0I3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.8■□□□□ 0.92
CCSER1Q9C0I3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.8■□□□□ 0.92
CCSER1Q9C0I3 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CCSER1Q9C0I3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCSER1Q9C0I3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCSER1Q9C0I3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.8■□□□□ 0.92
CCSER1Q9C0I3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.8■□□□□ 0.92
CCSER1Q9C0I3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.8■□□□□ 0.92
CCSER1Q9C0I3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.8■□□□□ 0.92
CCSER1Q9C0I3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.8■□□□□ 0.92
CCSER1Q9C0I3 KRT18P23-201ENST00000435622 1283 ntBASIC20.8■□□□□ 0.92
CCSER1Q9C0I3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCSER1Q9C0I3 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.8■□□□□ 0.92
CCSER1Q9C0I3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCSER1Q9C0I3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCSER1Q9C0I3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCSER1Q9C0I3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCSER1Q9C0I3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.8■□□□□ 0.92
CCSER1Q9C0I3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCSER1Q9C0I3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCSER1Q9C0I3 AL163051.1-201ENST00000569214 1512 ntBASIC20.79■□□□□ 0.92
CCSER1Q9C0I3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.79■□□□□ 0.92
CCSER1Q9C0I3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCSER1Q9C0I3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCSER1Q9C0I3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.79■□□□□ 0.92
CCSER1Q9C0I3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCSER1Q9C0I3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.79■□□□□ 0.92
CCSER1Q9C0I3 ECEL1P2-202ENST00000465689 757 ntBASIC20.79■□□□□ 0.92
CCSER1Q9C0I3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.79■□□□□ 0.92
CCSER1Q9C0I3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.79■□□□□ 0.92
CCSER1Q9C0I3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.79■□□□□ 0.92
CCSER1Q9C0I3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CCSER1Q9C0I3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CCSER1Q9C0I3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCSER1Q9C0I3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCSER1Q9C0I3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.79■□□□□ 0.92
CCSER1Q9C0I3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCSER1Q9C0I3 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCSER1Q9C0I3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.79■□□□□ 0.92
CCSER1Q9C0I3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.79■□□□□ 0.92
CCSER1Q9C0I3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.79■□□□□ 0.92
CCSER1Q9C0I3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCSER1Q9C0I3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCSER1Q9C0I3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.79■□□□□ 0.92
CCSER1Q9C0I3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 AL390961.4-201ENST00000623958 2535 ntBASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 HMGA1P5-201ENST00000412453 271 ntBASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.78■□□□□ 0.92
CCSER1Q9C0I3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms