Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.43■□□□□ 0.22
VRK1Q99986 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
VRK1Q99986 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
VRK1Q99986 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.43■□□□□ 0.22
VRK1Q99986 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.43■□□□□ 0.22
VRK1Q99986 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.43■□□□□ 0.22
VRK1Q99986 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 AC113347.1-201ENST00000413321 391 ntBASIC16.43■□□□□ 0.22
VRK1Q99986 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 MFAP1P1-201ENST00000442257 1255 ntBASIC16.43■□□□□ 0.22
VRK1Q99986 KRT18P57-201ENST00000443599 1254 ntBASIC16.43■□□□□ 0.22
VRK1Q99986 AC091390.4-202ENST00000476426 537 ntBASIC16.43■□□□□ 0.22
VRK1Q99986 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.43■□□□□ 0.22
VRK1Q99986 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.43■□□□□ 0.22
VRK1Q99986 AC092865.7-201ENST00000641832 219 ntBASIC16.43■□□□□ 0.22
VRK1Q99986 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.43■□□□□ 0.22
VRK1Q99986 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
VRK1Q99986 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
VRK1Q99986 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.43■□□□□ 0.22
VRK1Q99986 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 AP000997.3-201ENST00000623333 2250 ntBASIC16.43■□□□□ 0.22
VRK1Q99986 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.43■□□□□ 0.22
VRK1Q99986 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VRK1Q99986 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.42■□□□□ 0.22
VRK1Q99986 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VRK1Q99986 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.42■□□□□ 0.22
VRK1Q99986 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
VRK1Q99986 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.42■□□□□ 0.22
VRK1Q99986 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VRK1Q99986 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
VRK1Q99986 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VRK1Q99986 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.42■□□□□ 0.22
VRK1Q99986 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.42■□□□□ 0.22
VRK1Q99986 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VRK1Q99986 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
VRK1Q99986 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.42■□□□□ 0.22
VRK1Q99986 SLC25A3P1-201ENST00000443844 931 ntBASIC16.42■□□□□ 0.22
VRK1Q99986 AC008040.2-201ENST00000461049 708 ntBASIC16.42■□□□□ 0.22
VRK1Q99986 ECEL1P2-202ENST00000465689 757 ntBASIC16.42■□□□□ 0.22
VRK1Q99986 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.42■□□□□ 0.22
VRK1Q99986 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.42■□□□□ 0.22
VRK1Q99986 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VRK1Q99986 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VRK1Q99986 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.42■□□□□ 0.22
VRK1Q99986 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
VRK1Q99986 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
VRK1Q99986 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VRK1Q99986 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VRK1Q99986 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VRK1Q99986 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VRK1Q99986 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VRK1Q99986 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
VRK1Q99986 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.42■□□□□ 0.22
VRK1Q99986 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.42■□□□□ 0.22
VRK1Q99986 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
VRK1Q99986 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VRK1Q99986 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VRK1Q99986 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VRK1Q99986 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.42■□□□□ 0.22
VRK1Q99986 AC009113.1-201ENST00000570267 2443 ntBASIC16.41■□□□□ 0.22
VRK1Q99986 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
VRK1Q99986 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.41■□□□□ 0.22
VRK1Q99986 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VRK1Q99986 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
VRK1Q99986 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
VRK1Q99986 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VRK1Q99986 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VRK1Q99986 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.41■□□□□ 0.22
VRK1Q99986 Z85996.1-201ENST00000494644 937 ntBASIC16.41■□□□□ 0.22
VRK1Q99986 EGLN1P1-201ENST00000531623 762 ntBASIC16.41■□□□□ 0.22
VRK1Q99986 AL049597.2-201ENST00000565575 961 ntBASIC16.41■□□□□ 0.22
VRK1Q99986 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VRK1Q99986 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
VRK1Q99986 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VRK1Q99986 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
VRK1Q99986 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VRK1Q99986 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.41■□□□□ 0.22
VRK1Q99986 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VRK1Q99986 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VRK1Q99986 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
VRK1Q99986 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VRK1Q99986 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VRK1Q99986 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms