Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDX2Q99626 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDX2Q99626 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.41■□□□□ 0.7
CDX2Q99626 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDX2Q99626 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CDX2Q99626 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDX2Q99626 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDX2Q99626 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDX2Q99626 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDX2Q99626 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.4■□□□□ 0.7
CDX2Q99626 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.4■□□□□ 0.7
CDX2Q99626 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDX2Q99626 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
CDX2Q99626 PRSS29P-201ENST00000440800 595 ntBASIC19.4■□□□□ 0.7
CDX2Q99626 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.4■□□□□ 0.7
CDX2Q99626 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.4■□□□□ 0.7
CDX2Q99626 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.4■□□□□ 0.7
CDX2Q99626 AC011467.2-201ENST00000598425 242 ntBASIC19.4■□□□□ 0.7
CDX2Q99626 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDX2Q99626 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.4■□□□□ 0.7
CDX2Q99626 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.4■□□□□ 0.7
CDX2Q99626 AC092865.6-201ENST00000642101 219 ntBASIC19.4■□□□□ 0.7
CDX2Q99626 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDX2Q99626 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDX2Q99626 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDX2Q99626 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDX2Q99626 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.4■□□□□ 0.7
CDX2Q99626 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.4■□□□□ 0.7
CDX2Q99626 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDX2Q99626 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.4■□□□□ 0.7
CDX2Q99626 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDX2Q99626 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDX2Q99626 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.39■□□□□ 0.7
CDX2Q99626 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDX2Q99626 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.39■□□□□ 0.7
CDX2Q99626 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDX2Q99626 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.39■□□□□ 0.69
CDX2Q99626 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.39■□□□□ 0.69
CDX2Q99626 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDX2Q99626 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
CDX2Q99626 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDX2Q99626 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.39■□□□□ 0.69
CDX2Q99626 TSEN15P1-201ENST00000423257 515 ntBASIC19.39■□□□□ 0.69
CDX2Q99626 LAGE3P1-201ENST00000425356 484 ntBASIC19.39■□□□□ 0.69
CDX2Q99626 AC007274.1-201ENST00000439805 662 ntBASIC19.39■□□□□ 0.69
CDX2Q99626 CEND1P1-201ENST00000451006 455 ntBASIC19.39■□□□□ 0.69
CDX2Q99626 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.39■□□□□ 0.69
CDX2Q99626 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.39■□□□□ 0.69
CDX2Q99626 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.39■□□□□ 0.69
CDX2Q99626 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.39■□□□□ 0.69
CDX2Q99626 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.39■□□□□ 0.69
CDX2Q99626 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CDX2Q99626 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.39■□□□□ 0.69
CDX2Q99626 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDX2Q99626 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.39■□□□□ 0.69
CDX2Q99626 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.39■□□□□ 0.69
CDX2Q99626 ELL2P1-201ENST00000413990 1906 ntBASIC19.39■□□□□ 0.69
CDX2Q99626 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDX2Q99626 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDX2Q99626 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDX2Q99626 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.38■□□□□ 0.69
CDX2Q99626 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDX2Q99626 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.38■□□□□ 0.69
CDX2Q99626 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDX2Q99626 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDX2Q99626 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDX2Q99626 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDX2Q99626 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CDX2Q99626 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDX2Q99626 AC015922.1-201ENST00000421102 1152 ntBASIC19.38■□□□□ 0.69
CDX2Q99626 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDX2Q99626 MKNK2P1-201ENST00000437526 628 ntBASIC19.38■□□□□ 0.69
CDX2Q99626 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.38■□□□□ 0.69
CDX2Q99626 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDX2Q99626 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.38■□□□□ 0.69
CDX2Q99626 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.38■□□□□ 0.69
CDX2Q99626 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.38■□□□□ 0.69
CDX2Q99626 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.38■□□□□ 0.69
CDX2Q99626 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.38■□□□□ 0.69
CDX2Q99626 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CDX2Q99626 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDX2Q99626 AL078644.1-201ENST00000609881 752 ntBASIC19.38■□□□□ 0.69
CDX2Q99626 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CDX2Q99626 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDX2Q99626 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDX2Q99626 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDX2Q99626 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDX2Q99626 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDX2Q99626 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDX2Q99626 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CDX2Q99626 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDX2Q99626 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDX2Q99626 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CDX2Q99626 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.37■□□□□ 0.69
CDX2Q99626 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CDX2Q99626 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDX2Q99626 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.37■□□□□ 0.69
CDX2Q99626 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDX2Q99626 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.37■□□□□ 0.69
CDX2Q99626 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms