Protein–RNA interactions for Protein: Q99523

SORT1, Sortilin, humanhuman

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1Q99523 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SORT1Q99523 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SORT1Q99523 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SORT1Q99523 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SORT1Q99523 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SORT1Q99523 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SORT1Q99523 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
SORT1Q99523 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SORT1Q99523 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SORT1Q99523 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SORT1Q99523 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.16■□□□□ 0.5
SORT1Q99523 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.16■□□□□ 0.5
SORT1Q99523 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SORT1Q99523 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SORT1Q99523 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.16■□□□□ 0.5
SORT1Q99523 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SORT1Q99523 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.16■□□□□ 0.5
SORT1Q99523 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SORT1Q99523 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.16■□□□□ 0.5
SORT1Q99523 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.16■□□□□ 0.5
SORT1Q99523 AL445675.2-201ENST00000620291 557 ntBASIC18.16■□□□□ 0.5
SORT1Q99523 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SORT1Q99523 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.16■□□□□ 0.5
SORT1Q99523 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.16■□□□□ 0.5
SORT1Q99523 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SORT1Q99523 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.16■□□□□ 0.5
SORT1Q99523 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SORT1Q99523 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.16■□□□□ 0.5
SORT1Q99523 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SORT1Q99523 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SORT1Q99523 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SORT1Q99523 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.16■□□□□ 0.5
SORT1Q99523 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SORT1Q99523 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.16■□□□□ 0.5
SORT1Q99523 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.16■□□□□ 0.5
SORT1Q99523 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.15■□□□□ 0.5
SORT1Q99523 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.15■□□□□ 0.5
SORT1Q99523 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SORT1Q99523 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SORT1Q99523 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SORT1Q99523 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SORT1Q99523 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.15■□□□□ 0.5
SORT1Q99523 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SORT1Q99523 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.15■□□□□ 0.5
SORT1Q99523 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
SORT1Q99523 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SORT1Q99523 FLJ13224-201ENST00000313737 1514 ntBASIC18.15■□□□□ 0.5
SORT1Q99523 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SORT1Q99523 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.15■□□□□ 0.5
SORT1Q99523 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SORT1Q99523 AC004980.1-204ENST00000429707 299 ntBASIC18.15■□□□□ 0.5
SORT1Q99523 KRT18P41-201ENST00000518924 1277 ntBASIC18.15■□□□□ 0.5
SORT1Q99523 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.15■□□□□ 0.5
SORT1Q99523 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.15■□□□□ 0.5
SORT1Q99523 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SORT1Q99523 AC142086.2-201ENST00000569753 217 ntBASIC18.15■□□□□ 0.5
SORT1Q99523 AC233263.1-201ENST00000578059 224 ntBASIC18.15■□□□□ 0.5
SORT1Q99523 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SORT1Q99523 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SORT1Q99523 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SORT1Q99523 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SORT1Q99523 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SORT1Q99523 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.15■□□□□ 0.5
SORT1Q99523 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SORT1Q99523 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SORT1Q99523 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SORT1Q99523 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SORT1Q99523 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.15■□□□□ 0.5
SORT1Q99523 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.15■□□□□ 0.5
SORT1Q99523 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.15■□□□□ 0.5
SORT1Q99523 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SORT1Q99523 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SORT1Q99523 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SORT1Q99523 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.5
SORT1Q99523 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SORT1Q99523 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.14■□□□□ 0.49
SORT1Q99523 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SORT1Q99523 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SORT1Q99523 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SORT1Q99523 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SORT1Q99523 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.14■□□□□ 0.49
SORT1Q99523 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SORT1Q99523 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.14■□□□□ 0.49
SORT1Q99523 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
SORT1Q99523 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SORT1Q99523 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.14■□□□□ 0.49
SORT1Q99523 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.14■□□□□ 0.49
SORT1Q99523 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SORT1Q99523 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SORT1Q99523 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SORT1Q99523 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.14■□□□□ 0.49
SORT1Q99523 AC069544.1-201ENST00000609399 999 ntBASIC18.14■□□□□ 0.49
SORT1Q99523 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.14■□□□□ 0.49
SORT1Q99523 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SORT1Q99523 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SORT1Q99523 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SORT1Q99523 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SORT1Q99523 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.14■□□□□ 0.49
SORT1Q99523 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SORT1Q99523 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms