Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 TUBB3P1-201ENST00000405796 1332 ntBASIC5.65□□□□□ -1.5
HMCN1Q96RW7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 BX005266.1-201ENST00000473402 457 ntBASIC5.65□□□□□ -1.5
HMCN1Q96RW7 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 AC136632.2-201ENST00000512891 861 ntBASIC5.65□□□□□ -1.5
HMCN1Q96RW7 AP000344.2-201ENST00000512987 629 ntBASIC5.65□□□□□ -1.5
HMCN1Q96RW7 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC5.65□□□□□ -1.5
HMCN1Q96RW7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMCN1Q96RW7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 OR7E47P-204ENST00000575924 449 ntBASIC5.65□□□□□ -1.51
HMCN1Q96RW7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 RPF1-202ENST00000370656 724 ntTSL 2 BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 FAM86GP-201ENST00000448322 971 ntBASIC5.65□□□□□ -1.51
HMCN1Q96RW7 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 AC099568.2-201ENST00000609194 695 ntBASIC5.65□□□□□ -1.51
HMCN1Q96RW7 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC5.65□□□□□ -1.51
HMCN1Q96RW7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC5.64□□□□□ -1.51
HMCN1Q96RW7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 NKAPP1-205ENST00000585790 367 ntBASIC5.64□□□□□ -1.51
HMCN1Q96RW7 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 AC011467.2-201ENST00000598425 242 ntBASIC5.64□□□□□ -1.51
HMCN1Q96RW7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 IGHV3-72-202ENST00000621503 303 ntBASIC5.64□□□□□ -1.51
HMCN1Q96RW7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC5.64□□□□□ -1.51
HMCN1Q96RW7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms