Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALPK3Q96L96 INTS4P1-201ENST00000438455 1935 ntBASIC20.25■□□□□ 0.83
ALPK3Q96L96 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.25■□□□□ 0.83
ALPK3Q96L96 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALPK3Q96L96 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ALPK3Q96L96 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ALPK3Q96L96 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALPK3Q96L96 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.25■□□□□ 0.83
ALPK3Q96L96 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.25■□□□□ 0.83
ALPK3Q96L96 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.25■□□□□ 0.83
ALPK3Q96L96 UNC93B6-202ENST00000528242 690 ntBASIC20.25■□□□□ 0.83
ALPK3Q96L96 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
ALPK3Q96L96 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.25■□□□□ 0.83
ALPK3Q96L96 AC025062.2-201ENST00000605477 670 ntBASIC20.25■□□□□ 0.83
ALPK3Q96L96 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ALPK3Q96L96 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.25■□□□□ 0.83
ALPK3Q96L96 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALPK3Q96L96 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALPK3Q96L96 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ALPK3Q96L96 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ALPK3Q96L96 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ALPK3Q96L96 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ALPK3Q96L96 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC20.24■□□□□ 0.83
ALPK3Q96L96 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.24■□□□□ 0.83
ALPK3Q96L96 AC027612.4-201ENST00000605371 583 ntBASIC20.24■□□□□ 0.83
ALPK3Q96L96 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
ALPK3Q96L96 AP002414.3-201ENST00000589352 1468 ntBASIC20.24■□□□□ 0.83
ALPK3Q96L96 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ALPK3Q96L96 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ALPK3Q96L96 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ALPK3Q96L96 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.24■□□□□ 0.83
ALPK3Q96L96 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ALPK3Q96L96 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ALPK3Q96L96 COX20P2-201ENST00000452636 358 ntBASIC20.23■□□□□ 0.83
ALPK3Q96L96 HLA-J-202ENST00000469281 1241 ntBASIC20.23■□□□□ 0.83
ALPK3Q96L96 HLA-J-203ENST00000494367 1087 ntBASIC20.23■□□□□ 0.83
ALPK3Q96L96 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.23■□□□□ 0.83
ALPK3Q96L96 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.23■□□□□ 0.83
ALPK3Q96L96 AC239800.4-201ENST00000603712 296 ntBASIC20.23■□□□□ 0.83
ALPK3Q96L96 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.23■□□□□ 0.83
ALPK3Q96L96 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ALPK3Q96L96 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.23■□□□□ 0.83
ALPK3Q96L96 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ALPK3Q96L96 AL512408.1-201ENST00000569378 2000 ntBASIC20.23■□□□□ 0.83
ALPK3Q96L96 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.23■□□□□ 0.83
ALPK3Q96L96 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ALPK3Q96L96 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ALPK3Q96L96 AC020907.5-201ENST00000624372 1936 ntBASIC20.23■□□□□ 0.83
ALPK3Q96L96 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ALPK3Q96L96 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
ALPK3Q96L96 AC254562.1-201ENST00000417586 456 ntBASIC20.23■□□□□ 0.83
ALPK3Q96L96 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.23■□□□□ 0.83
ALPK3Q96L96 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ALPK3Q96L96 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ALPK3Q96L96 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.23■□□□□ 0.83
ALPK3Q96L96 AL139288.1-201ENST00000623748 933 ntBASIC20.23■□□□□ 0.83
ALPK3Q96L96 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.23■□□□□ 0.83
ALPK3Q96L96 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ALPK3Q96L96 TP73-AS1-210ENST00000637775 1455 ntBASIC20.23■□□□□ 0.83
ALPK3Q96L96 AC112777.1-201ENST00000540175 1423 ntBASIC20.23■□□□□ 0.83
ALPK3Q96L96 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ALPK3Q96L96 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.23■□□□□ 0.83
ALPK3Q96L96 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ALPK3Q96L96 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ALPK3Q96L96 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ALPK3Q96L96 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ALPK3Q96L96 AC073314.1-201ENST00000568729 2216 ntBASIC20.22■□□□□ 0.83
ALPK3Q96L96 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ALPK3Q96L96 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ALPK3Q96L96 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ALPK3Q96L96 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ALPK3Q96L96 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ALPK3Q96L96 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ALPK3Q96L96 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ALPK3Q96L96 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.22■□□□□ 0.83
ALPK3Q96L96 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.22■□□□□ 0.83
ALPK3Q96L96 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.22■□□□□ 0.83
ALPK3Q96L96 RPS2P28-201ENST00000314255 741 ntBASIC20.21■□□□□ 0.83
ALPK3Q96L96 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.21■□□□□ 0.83
ALPK3Q96L96 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
ALPK3Q96L96 ABCD1P5-201ENST00000445663 754 ntBASIC20.21■□□□□ 0.83
ALPK3Q96L96 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.21■□□□□ 0.83
ALPK3Q96L96 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.21■□□□□ 0.83
ALPK3Q96L96 AC011467.4-201ENST00000594891 528 ntBASIC20.21■□□□□ 0.83
ALPK3Q96L96 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.21■□□□□ 0.83
ALPK3Q96L96 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ALPK3Q96L96 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
ALPK3Q96L96 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ALPK3Q96L96 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.21■□□□□ 0.83
ALPK3Q96L96 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ALPK3Q96L96 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
ALPK3Q96L96 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ALPK3Q96L96 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ALPK3Q96L96 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ALPK3Q96L96 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.21■□□□□ 0.83
ALPK3Q96L96 LHX6-205ENST00000464484 666 ntTSL 2 BASIC20.21■□□□□ 0.83
ALPK3Q96L96 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ALPK3Q96L96 MTDHP5-201ENST00000598980 586 ntBASIC20.21■□□□□ 0.83
ALPK3Q96L96 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.21■□□□□ 0.83
ALPK3Q96L96 AC083906.6-201ENST00000641366 219 ntBASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms