Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 AC130371.2-201ENST00000619443 611 ntBASIC20.51■□□□□ 0.87
RPGRIP1Q96KN7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.51■□□□□ 0.87
RPGRIP1Q96KN7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRIP1Q96KN7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.51■□□□□ 0.87
RPGRIP1Q96KN7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.51■□□□□ 0.87
RPGRIP1Q96KN7 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRIP1Q96KN7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 AC020763.4-201ENST00000623414 4170 ntBASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 CCR12P-201ENST00000446203 998 ntBASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 AP000692.2-201ENST00000608391 879 ntBASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 AC011558.1-201ENST00000623459 338 ntBASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 AL121956.5-201ENST00000625261 221 ntBASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 TEX21P-204ENST00000641479 1693 ntBASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 AL354751.1-201ENST00000412768 1863 ntBASIC20.5■□□□□ 0.87
RPGRIP1Q96KN7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.49■□□□□ 0.87
RPGRIP1Q96KN7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1Q96KN7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
RPGRIP1Q96KN7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.49■□□□□ 0.87
RPGRIP1Q96KN7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1Q96KN7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1Q96KN7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1Q96KN7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1Q96KN7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1Q96KN7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RPGRIP1Q96KN7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1Q96KN7 HCG4P8-203ENST00000443049 980 ntBASIC20.49■□□□□ 0.87
RPGRIP1Q96KN7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.49■□□□□ 0.87
RPGRIP1Q96KN7 AC011298.2-201ENST00000617989 482 ntBASIC20.49■□□□□ 0.87
RPGRIP1Q96KN7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1Q96KN7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1Q96KN7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RPGRIP1Q96KN7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
RPGRIP1Q96KN7 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.49■□□□□ 0.87
RPGRIP1Q96KN7 NOC2LP2-201ENST00000407594 1944 ntBASIC20.49■□□□□ 0.87
RPGRIP1Q96KN7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.49■□□□□ 0.87
RPGRIP1Q96KN7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
RPGRIP1Q96KN7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPGRIP1Q96KN7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RPGRIP1Q96KN7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPGRIP1Q96KN7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPGRIP1Q96KN7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPGRIP1Q96KN7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPGRIP1Q96KN7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPGRIP1Q96KN7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPGRIP1Q96KN7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPGRIP1Q96KN7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.48■□□□□ 0.87
RPGRIP1Q96KN7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPGRIP1Q96KN7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.48■□□□□ 0.87
RPGRIP1Q96KN7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.48■□□□□ 0.87
RPGRIP1Q96KN7 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.48■□□□□ 0.87
RPGRIP1Q96KN7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.48■□□□□ 0.87
RPGRIP1Q96KN7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RPGRIP1Q96KN7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPGRIP1Q96KN7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPGRIP1Q96KN7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RPGRIP1Q96KN7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPGRIP1Q96KN7 NOC2LP1-202ENST00000452600 2235 ntBASIC20.47■□□□□ 0.87
RPGRIP1Q96KN7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPGRIP1Q96KN7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPGRIP1Q96KN7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPGRIP1Q96KN7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPGRIP1Q96KN7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.47■□□□□ 0.87
RPGRIP1Q96KN7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPGRIP1Q96KN7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RPGRIP1Q96KN7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RPGRIP1Q96KN7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.47■□□□□ 0.87
RPGRIP1Q96KN7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RPGRIP1Q96KN7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms