Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 AC083849.1-201ENST00000615227 514 ntBASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 LINC01311-201ENST00000565162 1445 ntBASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SMARCD1Q96GM5 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCD1Q96GM5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCD1Q96GM5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.56■□□□□ 0.72
SMARCD1Q96GM5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCD1Q96GM5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCD1Q96GM5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCD1Q96GM5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCD1Q96GM5 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SMARCD1Q96GM5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
SMARCD1Q96GM5 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.56■□□□□ 0.72
SMARCD1Q96GM5 AC112777.1-201ENST00000540175 1423 ntBASIC19.56■□□□□ 0.72
SMARCD1Q96GM5 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCD1Q96GM5 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.56■□□□□ 0.72
SMARCD1Q96GM5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SMARCD1Q96GM5 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SMARCD1Q96GM5 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCD1Q96GM5 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCD1Q96GM5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCD1Q96GM5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SMARCD1Q96GM5 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SMARCD1Q96GM5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCD1Q96GM5 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 HBZP1-201ENST00000354915 429 ntBASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 AC092597.1-201ENST00000487352 616 ntBASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 ZNF444P1-201ENST00000559497 298 ntBASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.55■□□□□ 0.72
SMARCD1Q96GM5 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 ANO7L1-203ENST00000602586 1720 ntBASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SMARCD1Q96GM5 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms