Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF31Q96EP0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF31Q96EP0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF31Q96EP0 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
RNF31Q96EP0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF31Q96EP0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF31Q96EP0 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RNF31Q96EP0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF31Q96EP0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RNF31Q96EP0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF31Q96EP0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF31Q96EP0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF31Q96EP0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF31Q96EP0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF31Q96EP0 AL023284.2-201ENST00000405850 579 ntBASIC17.94■□□□□ 0.46
RNF31Q96EP0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF31Q96EP0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.94■□□□□ 0.46
RNF31Q96EP0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF31Q96EP0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.94■□□□□ 0.46
RNF31Q96EP0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF31Q96EP0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.94■□□□□ 0.46
RNF31Q96EP0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.94■□□□□ 0.46
RNF31Q96EP0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.94■□□□□ 0.46
RNF31Q96EP0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.94■□□□□ 0.46
RNF31Q96EP0 LINC01311-201ENST00000565162 1445 ntBASIC17.94■□□□□ 0.46
RNF31Q96EP0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF31Q96EP0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF31Q96EP0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RNF31Q96EP0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF31Q96EP0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF31Q96EP0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF31Q96EP0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF31Q96EP0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF31Q96EP0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF31Q96EP0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF31Q96EP0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RNF31Q96EP0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF31Q96EP0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF31Q96EP0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF31Q96EP0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RNF31Q96EP0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF31Q96EP0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF31Q96EP0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF31Q96EP0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF31Q96EP0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF31Q96EP0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF31Q96EP0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF31Q96EP0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF31Q96EP0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF31Q96EP0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF31Q96EP0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF31Q96EP0 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF31Q96EP0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF31Q96EP0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF31Q96EP0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF31Q96EP0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF31Q96EP0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF31Q96EP0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RNF31Q96EP0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.93■□□□□ 0.46
RNF31Q96EP0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.93■□□□□ 0.46
RNF31Q96EP0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF31Q96EP0 AL512604.3-201ENST00000569583 964 ntBASIC17.93■□□□□ 0.46
RNF31Q96EP0 AL121956.5-201ENST00000625261 221 ntBASIC17.93■□□□□ 0.46
RNF31Q96EP0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RNF31Q96EP0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF31Q96EP0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF31Q96EP0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RNF31Q96EP0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RNF31Q96EP0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF31Q96EP0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF31Q96EP0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF31Q96EP0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RNF31Q96EP0 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RNF31Q96EP0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF31Q96EP0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF31Q96EP0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF31Q96EP0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF31Q96EP0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF31Q96EP0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF31Q96EP0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF31Q96EP0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF31Q96EP0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.92■□□□□ 0.46
RNF31Q96EP0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF31Q96EP0 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.92■□□□□ 0.46
RNF31Q96EP0 HYMAI.1-201ENST00000620949 238 ntBASIC17.92■□□□□ 0.46
RNF31Q96EP0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.92■□□□□ 0.46
RNF31Q96EP0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF31Q96EP0 AL031432.5-201ENST00000641059 760 ntBASIC17.92■□□□□ 0.46
RNF31Q96EP0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RNF31Q96EP0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF31Q96EP0 TEX21P-204ENST00000641479 1693 ntBASIC17.92■□□□□ 0.46
RNF31Q96EP0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RNF31Q96EP0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF31Q96EP0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RNF31Q96EP0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.91■□□□□ 0.46
RNF31Q96EP0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RNF31Q96EP0 AC020763.4-201ENST00000623414 4170 ntBASIC17.91■□□□□ 0.46
RNF31Q96EP0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RNF31Q96EP0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.91■□□□□ 0.46
RNF31Q96EP0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms