Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.73■□□□□ 0.27
PTP4A1Q93096 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PTP4A1Q93096 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.73■□□□□ 0.27
PTP4A1Q93096 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTP4A1Q93096 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTP4A1Q93096 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
PTP4A1Q93096 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.73■□□□□ 0.27
PTP4A1Q93096 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.73■□□□□ 0.27
PTP4A1Q93096 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTP4A1Q93096 MYC-208ENST00000641036 567 ntBASIC16.73■□□□□ 0.27
PTP4A1Q93096 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PTP4A1Q93096 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
PTP4A1Q93096 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTP4A1Q93096 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.73■□□□□ 0.27
PTP4A1Q93096 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTP4A1Q93096 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTP4A1Q93096 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTP4A1Q93096 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTP4A1Q93096 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTP4A1Q93096 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTP4A1Q93096 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTP4A1Q93096 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.73■□□□□ 0.27
PTP4A1Q93096 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.73■□□□□ 0.27
PTP4A1Q93096 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PTP4A1Q93096 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTP4A1Q93096 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTP4A1Q93096 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PTP4A1Q93096 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
PTP4A1Q93096 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PTP4A1Q93096 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
PTP4A1Q93096 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTP4A1Q93096 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.72■□□□□ 0.27
PTP4A1Q93096 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTP4A1Q93096 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTP4A1Q93096 KRT8P45-201ENST00000414328 1447 ntBASIC16.72■□□□□ 0.27
PTP4A1Q93096 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
PTP4A1Q93096 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PTP4A1Q93096 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
PTP4A1Q93096 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTP4A1Q93096 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.72■□□□□ 0.27
PTP4A1Q93096 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.72■□□□□ 0.27
PTP4A1Q93096 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.72■□□□□ 0.27
PTP4A1Q93096 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTP4A1Q93096 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
PTP4A1Q93096 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.72■□□□□ 0.27
PTP4A1Q93096 AC091390.4-202ENST00000476426 537 ntBASIC16.72■□□□□ 0.27
PTP4A1Q93096 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTP4A1Q93096 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
PTP4A1Q93096 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PTP4A1Q93096 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.72■□□□□ 0.27
PTP4A1Q93096 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.72■□□□□ 0.27
PTP4A1Q93096 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.72■□□□□ 0.27
PTP4A1Q93096 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTP4A1Q93096 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.72■□□□□ 0.27
PTP4A1Q93096 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.72■□□□□ 0.27
PTP4A1Q93096 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
PTP4A1Q93096 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PTP4A1Q93096 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PTP4A1Q93096 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTP4A1Q93096 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTP4A1Q93096 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.72■□□□□ 0.27
PTP4A1Q93096 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
PTP4A1Q93096 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTP4A1Q93096 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTP4A1Q93096 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTP4A1Q93096 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.72■□□□□ 0.27
PTP4A1Q93096 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PTP4A1Q93096 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PTP4A1Q93096 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A1Q93096 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.71■□□□□ 0.27
PTP4A1Q93096 AC093677.2-201ENST00000600169 1863 ntBASIC16.71■□□□□ 0.27
PTP4A1Q93096 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
PTP4A1Q93096 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PTP4A1Q93096 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A1Q93096 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A1Q93096 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A1Q93096 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A1Q93096 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A1Q93096 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.71■□□□□ 0.27
PTP4A1Q93096 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A1Q93096 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PTP4A1Q93096 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.71■□□□□ 0.27
PTP4A1Q93096 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.71■□□□□ 0.27
PTP4A1Q93096 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A1Q93096 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A1Q93096 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PTP4A1Q93096 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.71■□□□□ 0.27
PTP4A1Q93096 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A1Q93096 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A1Q93096 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PTP4A1Q93096 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.7■□□□□ 0.26
PTP4A1Q93096 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.7■□□□□ 0.26
PTP4A1Q93096 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.7■□□□□ 0.26
PTP4A1Q93096 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTP4A1Q93096 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTP4A1Q93096 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTP4A1Q93096 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTP4A1Q93096 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.7■□□□□ 0.26
PTP4A1Q93096 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PTP4A1Q93096 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms