Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
USP9XQ93008 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
USP9XQ93008 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.17■□□□□ 0.18
USP9XQ93008 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.17■□□□□ 0.18
USP9XQ93008 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.17■□□□□ 0.18
USP9XQ93008 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.17■□□□□ 0.18
USP9XQ93008 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.17■□□□□ 0.18
USP9XQ93008 AL512408.1-201ENST00000569378 2000 ntBASIC16.16■□□□□ 0.18
USP9XQ93008 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
USP9XQ93008 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
USP9XQ93008 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP9XQ93008 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
USP9XQ93008 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USP9XQ93008 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USP9XQ93008 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.16■□□□□ 0.18
USP9XQ93008 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
USP9XQ93008 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP9XQ93008 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP9XQ93008 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
USP9XQ93008 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.16■□□□□ 0.18
USP9XQ93008 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.16■□□□□ 0.18
USP9XQ93008 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.16■□□□□ 0.18
USP9XQ93008 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.16■□□□□ 0.18
USP9XQ93008 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.16■□□□□ 0.18
USP9XQ93008 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.16■□□□□ 0.18
USP9XQ93008 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP9XQ93008 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP9XQ93008 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP9XQ93008 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USP9XQ93008 AL162377.1-201ENST00000618844 1793 ntBASIC16.16■□□□□ 0.18
USP9XQ93008 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USP9XQ93008 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP9XQ93008 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USP9XQ93008 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.16■□□□□ 0.18
USP9XQ93008 AC254562.1-201ENST00000417586 456 ntBASIC16.16■□□□□ 0.18
USP9XQ93008 AC005034.1-201ENST00000426657 489 ntBASIC16.16■□□□□ 0.18
USP9XQ93008 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.16■□□□□ 0.18
USP9XQ93008 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.16■□□□□ 0.18
USP9XQ93008 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.16■□□□□ 0.18
USP9XQ93008 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP9XQ93008 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.16■□□□□ 0.18
USP9XQ93008 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.16■□□□□ 0.18
USP9XQ93008 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.16■□□□□ 0.18
USP9XQ93008 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP9XQ93008 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.16■□□□□ 0.18
USP9XQ93008 AC006333.2-201ENST00000607957 2099 ntBASIC16.16■□□□□ 0.18
USP9XQ93008 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.15■□□□□ 0.18
USP9XQ93008 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP9XQ93008 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USP9XQ93008 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.15■□□□□ 0.18
USP9XQ93008 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USP9XQ93008 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
USP9XQ93008 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.15■□□□□ 0.18
USP9XQ93008 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.15■□□□□ 0.18
USP9XQ93008 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.15■□□□□ 0.18
USP9XQ93008 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.15■□□□□ 0.18
USP9XQ93008 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.15■□□□□ 0.18
USP9XQ93008 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.15■□□□□ 0.18
USP9XQ93008 AL512353.2-201ENST00000448759 1962 ntBASIC16.15■□□□□ 0.18
USP9XQ93008 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
USP9XQ93008 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
USP9XQ93008 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
USP9XQ93008 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USP9XQ93008 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP9XQ93008 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.15■□□□□ 0.18
USP9XQ93008 RPS2P28-201ENST00000314255 741 ntBASIC16.15■□□□□ 0.18
USP9XQ93008 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP9XQ93008 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.15■□□□□ 0.18
USP9XQ93008 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USP9XQ93008 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP9XQ93008 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP9XQ93008 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.14■□□□□ 0.17
USP9XQ93008 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP9XQ93008 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.14■□□□□ 0.17
USP9XQ93008 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP9XQ93008 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP9XQ93008 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.14■□□□□ 0.17
USP9XQ93008 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.14■□□□□ 0.17
USP9XQ93008 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
USP9XQ93008 OR7E14P-202ENST00000530490 1290 ntBASIC16.14■□□□□ 0.17
USP9XQ93008 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
USP9XQ93008 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
USP9XQ93008 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.14■□□□□ 0.17
USP9XQ93008 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
USP9XQ93008 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.14■□□□□ 0.17
USP9XQ93008 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
USP9XQ93008 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.14■□□□□ 0.17
USP9XQ93008 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP9XQ93008 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
USP9XQ93008 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
USP9XQ93008 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP9XQ93008 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
USP9XQ93008 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.14■□□□□ 0.17
USP9XQ93008 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.14■□□□□ 0.17
USP9XQ93008 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP9XQ93008 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.14■□□□□ 0.17
USP9XQ93008 AL078644.1-201ENST00000609881 752 ntBASIC16.14■□□□□ 0.17
USP9XQ93008 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP9XQ93008 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
USP9XQ93008 AC002310.6-201ENST00000624451 1377 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms