Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ATL1Q8WXF7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATL1Q8WXF7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ATL1Q8WXF7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATL1Q8WXF7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATL1Q8WXF7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATL1Q8WXF7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATL1Q8WXF7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATL1Q8WXF7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATL1Q8WXF7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.17■□□□□ 0.5
ATL1Q8WXF7 BX088651.1-201ENST00000540551 451 ntBASIC18.17■□□□□ 0.5
ATL1Q8WXF7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.17■□□□□ 0.5
ATL1Q8WXF7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATL1Q8WXF7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATL1Q8WXF7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATL1Q8WXF7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATL1Q8WXF7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
ATL1Q8WXF7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATL1Q8WXF7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATL1Q8WXF7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATL1Q8WXF7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
ATL1Q8WXF7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATL1Q8WXF7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATL1Q8WXF7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.17■□□□□ 0.5
ATL1Q8WXF7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATL1Q8WXF7 AC008556.1-201ENST00000610908 2040 ntBASIC18.16■□□□□ 0.5
ATL1Q8WXF7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATL1Q8WXF7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATL1Q8WXF7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATL1Q8WXF7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ATL1Q8WXF7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATL1Q8WXF7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
ATL1Q8WXF7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATL1Q8WXF7 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
ATL1Q8WXF7 MIR564-202ENST00000385049 94 ntBASIC18.16■□□□□ 0.5
ATL1Q8WXF7 AL390955.1-201ENST00000428694 934 ntBASIC18.16■□□□□ 0.5
ATL1Q8WXF7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.16■□□□□ 0.5
ATL1Q8WXF7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.16■□□□□ 0.5
ATL1Q8WXF7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATL1Q8WXF7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.16■□□□□ 0.5
ATL1Q8WXF7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATL1Q8WXF7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 KRT8P45-201ENST00000414328 1447 ntBASIC18.15■□□□□ 0.5
ATL1Q8WXF7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 EGLN1P1-201ENST00000531623 762 ntBASIC18.15■□□□□ 0.5
ATL1Q8WXF7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 MIR3180-5-201ENST00000583743 153 ntBASIC18.15■□□□□ 0.5
ATL1Q8WXF7 AC066615.1-201ENST00000640911 628 ntBASIC18.15■□□□□ 0.5
ATL1Q8WXF7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
ATL1Q8WXF7 AC092338.2-201ENST00000568827 1415 ntBASIC18.15■□□□□ 0.5
ATL1Q8WXF7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
ATL1Q8WXF7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ATL1Q8WXF7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
ATL1Q8WXF7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.14■□□□□ 0.5
ATL1Q8WXF7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
ATL1Q8WXF7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATL1Q8WXF7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATL1Q8WXF7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
ATL1Q8WXF7 MMP23A-201ENST00000234610 1017 ntBASIC18.14■□□□□ 0.49
ATL1Q8WXF7 TSPY14P-201ENST00000303979 915 ntBASIC18.14■□□□□ 0.49
ATL1Q8WXF7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
ATL1Q8WXF7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATL1Q8WXF7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ATL1Q8WXF7 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
ATL1Q8WXF7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.14■□□□□ 0.49
ATL1Q8WXF7 AC128688.1-201ENST00000487626 519 ntBASIC18.14■□□□□ 0.49
ATL1Q8WXF7 KRT18P41-201ENST00000518924 1277 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms