Protein–RNA interactions for Protein: Q8TDM0

BCAS4, Breast carcinoma-amplified sequence 4, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4Q8TDM0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 AL121761.2-201ENST00000598007 1648 ntBASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 FLJ13224-201ENST00000313737 1514 ntBASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BCAS4Q8TDM0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.71■□□□□ 0.58
BCAS4Q8TDM0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 LINC00602-201ENST00000629776 2065 ntBASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.7■□□□□ 0.58
BCAS4Q8TDM0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 PCDHB19P-201ENST00000570871 2371 ntBASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BCAS4Q8TDM0 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BCAS4Q8TDM0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BCAS4Q8TDM0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
BCAS4Q8TDM0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BCAS4Q8TDM0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BCAS4Q8TDM0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BCAS4Q8TDM0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.68■□□□□ 0.58
BCAS4Q8TDM0 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BCAS4Q8TDM0 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BCAS4Q8TDM0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms