Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 AC124864.1-201ENST00000623408 392 ntBASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SNIP1Q8TAD8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.52■□□□□ 0.39
SNIP1Q8TAD8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNIP1Q8TAD8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNIP1Q8TAD8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNIP1Q8TAD8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SNIP1Q8TAD8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SNIP1Q8TAD8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
SNIP1Q8TAD8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNIP1Q8TAD8 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
SNIP1Q8TAD8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNIP1Q8TAD8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNIP1Q8TAD8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
SNIP1Q8TAD8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNIP1Q8TAD8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNIP1Q8TAD8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNIP1Q8TAD8 POM121L3P-201ENST00000419331 1163 ntBASIC17.51■□□□□ 0.39
SNIP1Q8TAD8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNIP1Q8TAD8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNIP1Q8TAD8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.51■□□□□ 0.39
SNIP1Q8TAD8 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.51■□□□□ 0.39
SNIP1Q8TAD8 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.51■□□□□ 0.39
SNIP1Q8TAD8 AL691432.2-201ENST00000607222 2038 ntBASIC17.51■□□□□ 0.39
SNIP1Q8TAD8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.51■□□□□ 0.39
SNIP1Q8TAD8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SNIP1Q8TAD8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNIP1Q8TAD8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SNIP1Q8TAD8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNIP1Q8TAD8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SNIP1Q8TAD8 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SNIP1Q8TAD8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.51■□□□□ 0.39
SNIP1Q8TAD8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 AP005901.3-202ENST00000581653 237 ntBASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 AC243591.1-201ENST00000452967 1364 ntBASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 RNF165-205ENST00000588679 2904 ntBASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.5■□□□□ 0.39
SNIP1Q8TAD8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SNIP1Q8TAD8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 AL109659.2-201ENST00000606809 1674 ntBASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SNIP1Q8TAD8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms