Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH19Q8TAB3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH19Q8TAB3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH19Q8TAB3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH19Q8TAB3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH19Q8TAB3 INGX-201ENST00000359239 846 ntBASIC19.22■□□□□ 0.67
PCDH19Q8TAB3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDH19Q8TAB3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDH19Q8TAB3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDH19Q8TAB3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.22■□□□□ 0.67
PCDH19Q8TAB3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDH19Q8TAB3 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDH19Q8TAB3 MIR3180-5-201ENST00000583743 153 ntBASIC19.22■□□□□ 0.67
PCDH19Q8TAB3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.22■□□□□ 0.67
PCDH19Q8TAB3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
PCDH19Q8TAB3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PCDH19Q8TAB3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH19Q8TAB3 AIRN-201ENST00000601203 4374 ntBASIC19.22■□□□□ 0.67
PCDH19Q8TAB3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH19Q8TAB3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDH19Q8TAB3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 AC007663.1-201ENST00000438948 1240 ntBASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 MYLKP1-201ENST00000509077 1580 ntBASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 AC036111.1-201ENST00000533973 1582 ntBASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCDH19Q8TAB3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDH19Q8TAB3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH19Q8TAB3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.2■□□□□ 0.66
PCDH19Q8TAB3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDH19Q8TAB3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH19Q8TAB3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.2■□□□□ 0.66
PCDH19Q8TAB3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH19Q8TAB3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH19Q8TAB3 TSPY14P-201ENST00000303979 915 ntBASIC19.2■□□□□ 0.66
PCDH19Q8TAB3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDH19Q8TAB3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH19Q8TAB3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH19Q8TAB3 CCR12P-201ENST00000446203 998 ntBASIC19.2■□□□□ 0.66
PCDH19Q8TAB3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.2■□□□□ 0.66
PCDH19Q8TAB3 C2orf69P3-201ENST00000565542 1120 ntBASIC19.2■□□□□ 0.66
PCDH19Q8TAB3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH19Q8TAB3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH19Q8TAB3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH19Q8TAB3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PCDH19Q8TAB3 AC007613.1-201ENST00000572811 2597 ntBASIC19.2■□□□□ 0.66
PCDH19Q8TAB3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PCDH19Q8TAB3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PCDH19Q8TAB3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCDH19Q8TAB3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 AC034236.2-201ENST00000606662 1610 ntBASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 RCN1P1-201ENST00000400413 996 ntBASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 AC010331.1-201ENST00000611423 582 ntBASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 CR769767.2-201ENST00000622735 460 ntBASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 AC010947.1-201ENST00000623454 693 ntBASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 AC116562.4-202ENST00000641738 218 ntBASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.19■□□□□ 0.66
PCDH19Q8TAB3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
PCDH19Q8TAB3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH19Q8TAB3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDH19Q8TAB3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms