Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC10.23□□□□□ -0.77
SPTSSBQ8NFR3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 AL118508.1-201ENST00000613502 2345 ntBASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 AC139795.1-202ENST00000500444 432 ntBASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 AL499627.2-201ENST00000606283 725 ntBASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 LINC01465-201ENST00000408887 1940 ntBASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC10.22□□□□□ -0.77
SPTSSBQ8NFR3 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SPTSSBQ8NFR3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms