Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
RTL9Q8NET4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC22.9■■□□□ 1.26
RTL9Q8NET4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC22.9■■□□□ 1.26
RTL9Q8NET4 AC090616.6-201ENST00000582640 721 ntBASIC22.9■■□□□ 1.26
RTL9Q8NET4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
RTL9Q8NET4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC22.9■■□□□ 1.26
RTL9Q8NET4 IFNL4P1-201ENST00000607083 540 ntBASIC22.9■■□□□ 1.26
RTL9Q8NET4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RTL9Q8NET4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.9■■□□□ 1.26
RTL9Q8NET4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTL9Q8NET4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
RTL9Q8NET4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RTL9Q8NET4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
RTL9Q8NET4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.9■■□□□ 1.26
RTL9Q8NET4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTL9Q8NET4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RTL9Q8NET4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RTL9Q8NET4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC22.89■■□□□ 1.26
RTL9Q8NET4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC22.89■■□□□ 1.26
RTL9Q8NET4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RTL9Q8NET4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC22.89■■□□□ 1.26
RTL9Q8NET4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC22.89■■□□□ 1.26
RTL9Q8NET4 IL11-204ENST00000590625 1028 ntTSL 2 BASIC22.89■■□□□ 1.26
RTL9Q8NET4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.89■■□□□ 1.26
RTL9Q8NET4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
RTL9Q8NET4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RTL9Q8NET4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC22.89■■□□□ 1.25
RTL9Q8NET4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RTL9Q8NET4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RTL9Q8NET4 AC007952.6-201ENST00000573168 2673 ntBASIC22.89■■□□□ 1.25
RTL9Q8NET4 AC003957.1-201ENST00000625108 2673 ntBASIC22.89■■□□□ 1.25
RTL9Q8NET4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RTL9Q8NET4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.89■■□□□ 1.25
RTL9Q8NET4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.89■■□□□ 1.25
RTL9Q8NET4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RTL9Q8NET4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RTL9Q8NET4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RTL9Q8NET4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RTL9Q8NET4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC22.89■■□□□ 1.25
RTL9Q8NET4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC22.89■■□□□ 1.25
RTL9Q8NET4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC22.89■■□□□ 1.25
RTL9Q8NET4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC22.89■■□□□ 1.25
RTL9Q8NET4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC22.89■■□□□ 1.25
RTL9Q8NET4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC22.89■■□□□ 1.25
RTL9Q8NET4 AL732292.2-201ENST00000609649 430 ntBASIC22.89■■□□□ 1.25
RTL9Q8NET4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RTL9Q8NET4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTL9Q8NET4 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RTL9Q8NET4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTL9Q8NET4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.88■■□□□ 1.25
RTL9Q8NET4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTL9Q8NET4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTL9Q8NET4 AL163051.1-201ENST00000569214 1512 ntBASIC22.88■■□□□ 1.25
RTL9Q8NET4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
RTL9Q8NET4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC22.88■■□□□ 1.25
RTL9Q8NET4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTL9Q8NET4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTL9Q8NET4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RTL9Q8NET4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC22.88■■□□□ 1.25
RTL9Q8NET4 FAAHP1-202ENST00000446499 1238 ntBASIC22.88■■□□□ 1.25
RTL9Q8NET4 AC009078.2-202ENST00000463353 338 ntBASIC22.88■■□□□ 1.25
RTL9Q8NET4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC22.88■■□□□ 1.25
RTL9Q8NET4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RTL9Q8NET4 AC012615.1-201ENST00000565797 1299 ntBASIC22.88■■□□□ 1.25
RTL9Q8NET4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTL9Q8NET4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.87■■□□□ 1.25
RTL9Q8NET4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RTL9Q8NET4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RTL9Q8NET4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
RTL9Q8NET4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
RTL9Q8NET4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTL9Q8NET4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTL9Q8NET4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC22.87■■□□□ 1.25
RTL9Q8NET4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
RTL9Q8NET4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC22.87■■□□□ 1.25
RTL9Q8NET4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RTL9Q8NET4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
RTL9Q8NET4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC22.87■■□□□ 1.25
RTL9Q8NET4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTL9Q8NET4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTL9Q8NET4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RTL9Q8NET4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC22.86■■□□□ 1.25
RTL9Q8NET4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTL9Q8NET4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RTL9Q8NET4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTL9Q8NET4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC22.86■■□□□ 1.25
RTL9Q8NET4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC22.86■■□□□ 1.25
RTL9Q8NET4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC22.86■■□□□ 1.25
RTL9Q8NET4 TOB2P1-201ENST00000469761 992 ntBASIC22.86■■□□□ 1.25
RTL9Q8NET4 RN7SL606P-201ENST00000472779 293 ntBASIC22.86■■□□□ 1.25
RTL9Q8NET4 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC22.86■■□□□ 1.25
RTL9Q8NET4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RTL9Q8NET4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC22.86■■□□□ 1.25
RTL9Q8NET4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
RTL9Q8NET4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
RTL9Q8NET4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTL9Q8NET4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RTL9Q8NET4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.86■■□□□ 1.25
RTL9Q8NET4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
RTL9Q8NET4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms