Protein–RNA interactions for Protein: Q8NDA2

HMCN2, Hemicentin-2, humanhuman

Predictions only

Length 5,059 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN2Q8NDA2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC10.37□□□□□ -0.75
HMCN2Q8NDA2 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC10.37□□□□□ -0.75
HMCN2Q8NDA2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 HCG4B-203ENST00000450128 991 ntBASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 GPR89P-201ENST00000407924 1495 ntBASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 AC004449.1-201ENST00000564240 433 ntBASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC10.36□□□□□ -0.75
HMCN2Q8NDA2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 ANKRD18DP-204ENST00000455355 1975 ntBASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 AL139288.1-201ENST00000623748 933 ntBASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 HNRNPFP1-201ENST00000391730 1133 ntBASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 MIR1909-201ENST00000411312 80 ntBASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 BX005266.1-201ENST00000473402 457 ntBASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 AC004835.2-201ENST00000603762 682 ntBASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC10.35□□□□□ -0.75
HMCN2Q8NDA2 KRT8P7-201ENST00000533003 1432 ntBASIC10.34□□□□□ -0.75
HMCN2Q8NDA2 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HMCN2Q8NDA2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HMCN2Q8NDA2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
HMCN2Q8NDA2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC10.34□□□□□ -0.75
HMCN2Q8NDA2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
HMCN2Q8NDA2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC10.34□□□□□ -0.75
HMCN2Q8NDA2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
HMCN2Q8NDA2 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HMCN2Q8NDA2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
HMCN2Q8NDA2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
HMCN2Q8NDA2 COX5BP8-201ENST00000416911 349 ntBASIC10.34□□□□□ -0.75
HMCN2Q8NDA2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC10.34□□□□□ -0.75
HMCN2Q8NDA2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC10.34□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms