Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNEP1R1Q8N9A8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.54■□□□□ 0.24
CNEP1R1Q8N9A8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNEP1R1Q8N9A8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNEP1R1Q8N9A8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CNEP1R1Q8N9A8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 AC005332.1-201ENST00000577698 1310 ntBASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 SEC1P-202ENST00000473944 940 ntBASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CNEP1R1Q8N9A8 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CNEP1R1Q8N9A8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
CNEP1R1Q8N9A8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.52■□□□□ 0.24
CNEP1R1Q8N9A8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.52■□□□□ 0.24
CNEP1R1Q8N9A8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNEP1R1Q8N9A8 AC116562.4-201ENST00000641316 2276 ntBASIC16.52■□□□□ 0.24
CNEP1R1Q8N9A8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNEP1R1Q8N9A8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CNEP1R1Q8N9A8 MIR564-202ENST00000385049 94 ntBASIC16.52■□□□□ 0.24
CNEP1R1Q8N9A8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CNEP1R1Q8N9A8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CNEP1R1Q8N9A8 AC092597.1-201ENST00000487352 616 ntBASIC16.52■□□□□ 0.24
CNEP1R1Q8N9A8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNEP1R1Q8N9A8 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNEP1R1Q8N9A8 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CNEP1R1Q8N9A8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CNEP1R1Q8N9A8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.52■□□□□ 0.24
CNEP1R1Q8N9A8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.52■□□□□ 0.24
CNEP1R1Q8N9A8 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNEP1R1Q8N9A8 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNEP1R1Q8N9A8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CNEP1R1Q8N9A8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.52■□□□□ 0.23
CNEP1R1Q8N9A8 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNEP1R1Q8N9A8 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNEP1R1Q8N9A8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNEP1R1Q8N9A8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNEP1R1Q8N9A8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNEP1R1Q8N9A8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNEP1R1Q8N9A8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CNEP1R1Q8N9A8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 AL136038.3-201ENST00000561909 1096 ntBASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 HYMAI.1-201ENST00000620949 238 ntBASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 AL157888.1-201ENST00000631930 593 ntBASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 AC034236.2-201ENST00000606662 1610 ntBASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 AL161938.1-201ENST00000569833 2180 ntBASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CNEP1R1Q8N9A8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNEP1R1Q8N9A8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CNEP1R1Q8N9A8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CNEP1R1Q8N9A8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms