Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AL031284.1-201ENST00000419297 478 ntBASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 AL138831.2-201ENST00000606564 490 ntBASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
COL27A1Q8IZC6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
COL27A1Q8IZC6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 FGFR3P6-201ENST00000457012 610 ntBASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 AL049840.3-201ENST00000602669 611 ntBASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 AC011840.4-201ENST00000578471 627 ntBASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 AC139530.3-201ENST00000620344 690 ntBASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL27A1Q8IZC6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
COL27A1Q8IZC6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms